Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma12g00713 | ATGAAGCTTGTCAATAACCTCATAAAGGCTCCTGAAATGGCTGTGACAATGCAAGAGTTCAGCAAAGAAATGACAAAGGCAGGAGTTATTGAGGAGATAGTAAATGATGCTGTTGACACAGCACTAGATTCCGAGGACATAGAAGATGAGATAGAAGAAGAAGTCGATAAAGTCTTGACCGCAATAGCTGGTGAGACAGCCGCACAACTTCCTGAAGCTGCGAGGAAAGAAAGGGTGAAGCAACCTGCTCAAAGTGTTGGAGCCGCAGAGGAAGAGGCTATAGCTGAGGGTGTTGATGATGAGGAAGAAATGGAAGAAATAAGGGCCCGACTTGCTAAACACTCCTCTTGCCACAAACGCAAAACATGGGCATCATCACCATCCATCTCCAAAGTCTCTTTGTCTCTTGTTTTGCTTGTCTTCGTGTCAGTTTCTTCTTCTTATGCAACTCCTCGTTTCACCCATGGCCGTACCTACACACCACAATCACAAGCAGAAAAGCTCATACGAAGCCTTAACCTATTCCCAAAGGACTCGGTTAACATTATAAAAGGTGACCTTGATAGTTTTGTCCCAGGAAAGATCGTGGAGTCGAAGTTCTCATTTTTTGGTGATTCTGGGAATTCTATTCAAGACCTTCGTCACCATGCTGGCTACTATTCACTTCCTCATTCCAAAGCTGCAAGAATGTTCTACTTTTTCTTTGAATCACGGAAGAGCAAGGATGATCCTGTTGTAATATGGTTGACTGGAGGACCAGGGTGTGGAAGTGAATTAGCTTTGTTTTATGAGAATGGTTTTAGTTACTCTTCTGATGATACTGACATTCGGCATGATGAAGCAGGCGTTAGCAACGACTTATATGACTTCTTGCAGGGTTTTGCTATTGGTAATGGGTTAACAAATCCTGCAATTCAATACCCAGCATACCCAGATTTTGCGTTAGACAACGGAATAATTACAAAGGCTGCGTACGACAATATCAGCAAGTTAATCCCAGGGTGTGAACAAGCCGCAAAAACTTGCGGTACAAGTTCTTTTTCCCTTTATCACTCACACATCCCTTTTTTACTAATGTATATTGTTTCACTGTGTGATGTGCTGATACACAAAGTGCAATACTATGACATAAAGAAGTGTGAGGGAGAATTGTGCTATGACTTTAGTAACGTGGAGACGTTGTTAAACCAGCAGAAAGTGAAGAGTGCTTTAGGTGTGAGGGATGACTTGCAGTATGTTTTATGCAGTACAACAATGCACAATGCTCTGCTGCAAGATTGGATGACAAACCTTGAAGTGGGGATTCCTGCTCTTCTTGAGGATGGAATCAAGTTGCTTGTGTATGTAGGGGATCGAAGAAGATCTCATGGAATTGGCTTGGTGAGCCTACTACTTGATTCATTTGGAGATTGGAGCATAATTGTTTTTGAGTTGAAAAAACTATATAGGAATTCAAGGTGGGTTCATGGCATGGAGTGGTCAGGCCAAAAGGCATTTGGAAAATCTCCTACAGCGAAATTTGTGGTTGATGGTGTAGAAGCAGGATCTCTTAATAGCTATGGACCTCTCTCTTTTCCCAAGCTCCGATTGAATCACTCTGAGTTCAATCTTCCTGTTTCATGTGGTTTAGCTTAG | 1635 | 0.4232 | MKLVNNLIKAPEMAVTMQEFSKEMTKAGVIEEIVNDAVDTALDSEDIEDEIEEEVDKVLTAIAGETAAQLPEAARKERVKQPAQSVGAAEEEAIAEGVDDEEEMEEIRARLAKHSSCHKRKTWASSPSISKVSLSLVLLVFVSVSSSYATPRFTHGRTYTPQSQAEKLIRSLNLFPKDSVNIIKGDLDSFVPGKIVESKFSFFGDSGNSIQDLRHHAGYYSLPHSKAARMFYFFFESRKSKDDPVVIWLTGGPGCGSELALFYENGFSYSSDDTDIRHDEAGVSNDLYDFLQGFAIGNGLTNPAIQYPAYPDFALDNGIITKAAYDNISKLIPGCEQAAKTCGTSSFSLYHSHIPFLLMYIVSLCDVLIHKVQYYDIKKCEGELCYDFSNVETLLNQQKVKSALGVRDDLQYVLCSTTMHNALLQDWMTNLEVGIPALLEDGIKLLVYVGDRRRSHGIGLVSLLLDSFGDWSIIVFELKKLYRNSRWVHGMEWSGQKAFGKSPTAKFVVDGVEAGSLNSYGPLSFPKLRLNHSEFNLPVSCGLA | 544 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma12g00713 | 544 | MobiDBLite | consensus disorder prediction | 80 | 101 | - | - | |
| Gma12g00713 | 544 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 266 | 294 | IPR001563 | GO:0004185|GO:0006508 | |
| Gma12g00713 | 544 | Gene3D | alpha/beta hydrolase | 293 | 530 | IPR029058 | - | |
| Gma12g00713 | 544 | Gene3D | alpha/beta hydrolase | 195 | 292 | IPR029058 | - | |
| Gma12g00713 | 544 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 291 | 451 | IPR001563 | GO:0004185|GO:0006508 | |
| Gma12g00713 | 544 | Pfam | Snf7 | 1 | 75 | IPR005024 | GO:0007034 | |
| Gma12g00713 | 544 | PANTHER | SERINE CARBOXYPEPTIDASE 3 | 483 | 528 | - | - | |
| Gma12g00713 | 544 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 153 | 266 | IPR001563 | GO:0004185|GO:0006508 | |
| Gma12g00713 | 544 | Pfam | Serine carboxypeptidase | 291 | 451 | IPR001563 | GO:0004185|GO:0006508 | |
| Gma12g00713 | 544 | Pfam | Serine carboxypeptidase | 212 | 271 | IPR001563 | GO:0004185|GO:0006508 | |
| Gma12g00713 | 544 | Gene3D | - | 1 | 73 | - | - | |
| Gma12g00713 | 544 | SUPERFAMILY | alpha/beta-Hydrolases | 213 | 526 | IPR029058 | - | |
| Gma12g00713 | 544 | PANTHER | SERINE CARBOXYPEPTIDASE 3 | 291 | 451 | - | - | |
| Gma12g00713 | 544 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 483 | 528 | IPR001563 | GO:0004185|GO:0006508 | |
| Gma12g00713 | 544 | PANTHER | SERINE CARBOXYPEPTIDASE 3 | 266 | 294 | - | - | |
| Gma12g00713 | 544 | PANTHER | SERINE CARBOXYPEPTIDASE 3 | 153 | 266 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma12g00713 | Gma-Chr12 | 6356898 | 6370032 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma12g00713 | K16298 | - | gmx:100798795 | 468.388 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma12g00713 | 12 | 6356898 | 6370032 | Gma12g00713 | 12 | 6356898 | 6370032 | ECH | |
| Gma12g00713 | 12 | 6356898 | 6370032 | Gma11g01592 | 11 | 17123744 | 17128573 | GST | |
| Gma12g00713 | 12 | 6356898 | 6370032 | Gma13g02870 | 13 | 43227223 | 43230519 | PCT | |
| Gma12g00713 | 12 | 6356898 | 6370032 | Gma12g01677 | 12 | 37132696 | 37136037 | PCT |