Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01593 ATGGCATTGGCATCATCACCATCCCTCTCCAAAGTTTATCTGTTTCTTGTGTTGCTTTTGTTCATGTCAGTTTCTTCTTCTTATGCAACTTCTCGCTTCACCCATAAGCGTGACTACCCAACACAATCACAAGCAGAAAAACTCATAAGAAGCCTTAACCTATTACCAAAGGACTCAGTTAACATTGTAAAAGGTGACCATGTTGGTTTTGTCCCAGGAAAGATCGTGGAGAAGAAGTTCTCGCTATTTTGTGATTCTGGGCCTTCTATTGAAGACCTTGGTCACCATGCTGGCTACTATTCACTTCCTCATTCCAAAGCTGCTAGAATGTTCTACTTTTTCTTTGAATCACGGAACAATAAGGATGATCCTGTAGTGATATGGTTGACTGGAGGACCAGGGTGTGGAAGTGAATTAGCTTTGTTTTATGAGAATGGTCCTTTTCATATTGCCAATAACTTGTCTCTTACATGGAATGATTACGGCTGGGACCAGGCATCAAATATTTTATTTGTTGACCAACCTACGGGTACAGGTTTCAGTTACTCTTCTGAGGAAAGTGACATTCGTCATGATGAAACAGGAATTAGCAATGACTTATATGACTTCTTGCAGGAGTTTTTCAAGGCGCATCCTGAGTTTGTTAAGAATGATTTTTATATTACTGGAGAATCATACGCTGGGCACTATGTTCCGGCACTTGCATCCCGGGTTAACCAAGGAAATAAACAAAATCAAGGAATCCATATAAACCTCAAGGGTTTTGCTATTGGTAATGGATTAACAAATCCTGCAATTCAATACCAAGCTTACCCAGATTTTGCATTAGACAATGGAATAATTACAAATGCTGAGTACGATAACATCAGCAAGTTAATCCCAGGGTGTGAACAAGCTGCTAAAACTTGCGAAAATCAAGGTGGACAAAGTTGCGCGACTGCGTTATATATTTGTCAAAACATATTTAGTCTTATCTTGGATTATGCTGGCAACATTAATTACTATGACATCAGAAAGAAGTGTGTGGGAGAATTGTGCTATGACTTCGGTAACGTGGAGGAGTTTTTAAACCAGAAGAAAGTGAAGAGTGCTTTAGGTGTGAGGGATGACTTGCAGTATGTTTTATGCAGTACAACAGTTCATGCTGCTATGCTTCAAGATTGGATGAGAAACATGGAAGTGGGGATTCCTTCTCTTCTTGAGGATGGAATCAAGTTGCTTGTGTATGCAGGGGAAGAAGATCTCATATGCAATTGGCTTGGGAATTCAAGGTGGGCTCATGCCATGGAGTGGTCAGGCCAAAAGGCCTTTGGAACATCTTCTACAGTGAAATTTGTGGTTGATGGTGTAGAAGCAGGGTCTCTTAATAGCTATGGACCTCTCTCTTTTCTCAAGGTGCATGGGGCTGGGCACATGTTGAAGATATTCTCCACCTGGGTGTCTGCTGTGTGCTGTTACTGTAGCTCCTATTCAATCTCTCTTAGTTCAACCTTCCTGTTGCATGGCTACGGTTTTGGTTGGGAAAGTTATTCGGAGTTAAATTCGTTGTCATTAGCATATTGCTGA 1566 0.41 MALASSPSLSKVYLFLVLLLFMSVSSSYATSRFTHKRDYPTQSQAEKLIRSLNLLPKDSVNIVKGDHVGFVPGKIVEKKFSLFCDSGPSIEDLGHHAGYYSLPHSKAARMFYFFFESRNNKDDPVVIWLTGGPGCGSELALFYENGPFHIANNLSLTWNDYGWDQASNILFVDQPTGTGFSYSSEESDIRHDETGISNDLYDFLQEFFKAHPEFVKNDFYITGESYAGHYVPALASRVNQGNKQNQGIHINLKGFAIGNGLTNPAIQYQAYPDFALDNGIITNAEYDNISKLIPGCEQAAKTCENQGGQSCATALYICQNIFSLILDYAGNINYYDIRKKCVGELCYDFGNVEEFLNQKKVKSALGVRDDLQYVLCSTTVHAAMLQDWMRNMEVGIPSLLEDGIKLLVYAGEEDLICNWLGNSRWAHAMEWSGQKAFGTSSTVKFVVDGVEAGSLNSYGPLSFLKVHGAGHMLKIFSTWVSAVCCYCSSYSISLSSTFLLHGYGFGWESYSELNSLSLAYC 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01593 521 ProSitePatterns Serine carboxypeptidases, serine active site. 221 228 IPR018202 GO:0004185
Gma11g01593 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 182 IPR001563 GO:0004185|GO:0006508
Gma11g01593 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 461 474 IPR001563 GO:0004185|GO:0006508
Gma11g01593 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 171 IPR001563 GO:0004185|GO:0006508
Gma11g01593 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 207 232 IPR001563 GO:0004185|GO:0006508
Gma11g01593 521 Pfam Serine carboxypeptidase 93 473 IPR001563 GO:0004185|GO:0006508
Gma11g01593 521 SUPERFAMILY alpha/beta-Hydrolases 94 474 IPR029058 -
Gma11g01593 521 PANTHER SERINE CARBOXYPEPTIDASE 3 33 474 - -
Gma11g01593 521 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 474 IPR001563 GO:0004185|GO:0006508
Gma11g01593 521 Gene3D alpha/beta hydrolase 77 485 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01593 Gma-Chr11 17130085 17134508 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01593 K16298 - gmx:100798795 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01593 11 17130085 17134508 Gma11g01593 11 17130085 17134508 ECH
Gma13g02870 13 43227223 43230519 Gma11g01593 11 17130085 17134508 PCT
Gma12g01677 12 37132696 37136037 Gma11g01593 11 17130085 17134508 PCT