Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02819 ATGTTGAAAACCTTGGCACAATCTATCACCGATTTTGACCAACATAATCTGTTGACACATgggcattattacgttaatatagCCAAAAGTATTGTGTCATATTGTTTGGTTAAGGTTCACTTCGAAATCCTTCGCCATCTCATAATTTTATCTCCAATGGAATTGGGAAGCATAATTCACTTCCTTCAAGATAAGACCATTTTAGTCACTGGTGCCACTGGCTTCCTCGCAAAAATTTTTGTGGAAAAAATATTGAGGGTTCAACCAAATGTGAAGAAACTTTACCTTCTTTTGAGAGCCAGGGATACTGAATCTGCTACTCAACGTTTACATGCTGAGATCATAGGGAAGGACTTATTTAGATTGCTGAAGGAAAAACTGGGTACAAGATTCAATTCCTATGTGTCAGAAAAGTTGACAGTAGTACCTGGAGACATTTCTCAAGAGGACTTGAATTTGAAGGACCCAATTCTAGGGGAAGAGATTTTCAACCAAACAGATGTTATAGTTAATTTAGCTGCAACAACTAATTTTGATGAAAGATATGATGTTGCATTGGGTATAAATACATTAGGAGTTATGCATGTGTTGAGCTTCGCCAAAAAATGCGTCAAACTAAAAGTGCTAATCCACGTATCAACAGCTTATGTATGTGGAGAAAAAGAAGGACTCATACTAGAGGATCCACATCACTTTGGCGTGTCACTAAATGGAGTGCCCGGACTAGACATTGATATGGAAAAAAAAAATGTGGAGCAGAAATTGATTCAGCTTAGAGAGGAAGGAGCCACAGAACATGATATTGAATTGGCCATGAAGGACTTGGGTAGTGAAAGAGCAAAGATGTATGGATGGGCAAACACGTATGTCTTTACAAAGGCAATGGGAGAAATGCTTGTAGGAACTACAAAGGGAAACATGAACGTTGTAATTGTACGACCCACAATGGTTACTAGCACTCACACAGAACCTTTCCCTGGTTGGATTGAAGGTTTAAGAACCATAGACAGCATAGTTGTTGCGTACGGTAAAGGAAAACTAGCATGCTTCCTAGCGAATCTTAAGGCAGTTTTTGACGTGATACCGGCTGACATGGTGGTGAATACAATGCTAGTGGCCATGGTGGCTCATGCAAATCAACCTAGTGATATCATCTATCATTTGGGTTCCTCTGTTGTAAATCCAGTTAAGTACCTTAATCTTCGAGACTATAGCGTAAGATATTTCATGGAAAATCCTTGGATAAACAAGGATGGAAAGCCCGTCAAGGTTGGCAAAGTTACCATATTGAGCAACATGGATAGCTTCCGCAAATACATGTACATTCGTTACCTGCTTCCCTTAAAGGGGCTAGAGCTGGTCAATGCAGTTTCATGCCAGTATTTTCAGAAAATGTATCTTGACTTCAATCGGAAGATCCGTACTGTCATGCGATTGGTTGAACTTTACAAGCCTTACTTGTTCTTCAATGGGGTGTTTGATAATATGAACACAGAAAAGTTATTATCATCGGCAAGACAAGGTGGGGTAGAGACGGAATTTTTTTACTTTGACCCAAAAATGATTGATTGGGAGGACTATTTCATCAATATCCATTTTCCTGGTATCATCAAGCATGCCTTAAAATGA 1629 0.3874 MLKTLAQSITDFDQHNLLTHGHYYVNIAKSIVSYCLVKVHFEILRHLIILSPMELGSIIHFLQDKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRARDTESATQRLHAEIIGKDLFRLLKEKLGTRFNSYVSEKLTVVPGDISQEDLNLKDPILGEEIFNQTDVIVNLAATTNFDERYDVALGINTLGVMHVLSFAKKCVKLKVLIHVSTAYVCGEKEGLILEDPHHFGVSLNGVPGLDIDMEKKNVEQKLIQLREEGATEHDIELAMKDLGSERAKMYGWANTYVFTKAMGEMLVGTTKGNMNVVIVRPTMVTSTHTEPFPGWIEGLRTIDSIVVAYGKGKLACFLANLKAVFDVIPADMVVNTMLVAMVAHANQPSDIIYHLGSSVVNPVKYLNLRDYSVRYFMENPWINKDGKPVKVGKVTILSNMDSFRKYMYIRYLLPLKGLELVNAVSCQYFQKMYLDFNRKIRTVMRLVELYKPYLFFNGVFDNMNTEKLLSSARQGGVETEFFYFDPKMIDWEDYFINIHFPGIIKHALK 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02819 542 Pfam Male sterility protein 443 542 IPR033640 -
Gma13g02819 542 PANTHER FATTY ACYL-COA REDUCTASE 54 540 - -
Gma13g02819 542 CDD FAR_C 442 541 IPR033640 -
Gma13g02819 542 Pfam Male sterility protein 69 370 IPR013120 -
Gma13g02819 542 CDD FAR-N_SDR_e 65 413 - -
Gma13g02819 542 Gene3D - 60 437 - -
Gma13g02819 542 PANTHER MALE STERILITY PROTEIN 2-RELATED 54 540 IPR026055 GO:0080019
Gma13g02819 542 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 58 389 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02819 Gma-Chr13 42735512 42740205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02819 162 541 Acyl Lipid Metabolism Gene Families AT4G33790 60.789 7.18e-175 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02819 K13356 - gmx:100789566 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02819 13 42735512 42740205 Gma13g02819 13 42735512 42740205 ECH
Gma13g02819 13 42735512 42740205 Gma12g01731 12 37850241 37854618 GST
Gma13g02819 13 42735512 42740205 Gma12g00777 12 7225730 7232406 PCT
Gma13g02819 13 42735512 42740205 Gma11g01524 11 16187386 16191269 PCT
Gma12g00777 12 7225730 7232406 Gma13g02819 13 42735512 42740205 PCT
Gma11g01524 11 16187386 16191269 Gma13g02819 13 42735512 42740205 PCT