Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01524 ATGGAATTGGGAAGCATAACCGACTTCCTTCAGAACAAGAACATTTTGGTCATTGGTGCCACTGGCTTCCTTGCCAAAATTTTTGTGGAGAAGGTACTGAGAGTGCAACCAAATGTGAAGAAACTTTATCTACTTTTGAGAGCAACAGATGCCGAATCTGCCTCTCAACGATTGCACAATGAGATTATGCGGAAGGATTTGTTTAGATTGTTGAAAGAAAATGTTGGTGCAAAGTTCAATGCCTTTGTTTCAGAAAAGTTGACTCTTGTGCCTGGGGACATTTCTCAAGAGGACTTGAATTTGAAAGATCCCATTCTACGCGAAGAAATTTACAATCAAATTCATTGTATAGTCAATTTTGCTGCCACAACTAACTTTGATGAAAGATACGATGTTGCATTGGGTATAAATACATTCGGAGTTAAGCATGTTTTGAACTTTGCCAAAAGTTGTATTAAGCTAAAGGTGCTTGTCCACGTATCAACAGCATATGTATGTGGTGAGAGAGGAGGACTCATAGTAGAGGATCCATGCCAATTGGGTGTGTCGCTAAATGGAGTGCCTGGACTAGACATTGGCATGGAAAAGAGAGTGGTGGAGGATAAGATGAACCAACTTCATGAAGAGGGAGCCACGGAGGAGGATGTTAAAATGGCCATGAAAGACTTGGGTATGAAAAGAGCAACTTTATATGGATGGCCAAACACATATGTCTTCACAAAAGCAATGGGAGAAATGCTTGTAGAAACTCTAAAGAAAAATATGTCTGTTATTATTGTACGTCCCACAATGATTACCAGTACTTACAAAGAACCTTTCCCTGGATGGGTTGAAGGAGTAAGAACCATAGATAGTGTAATTGTTGCTTATGGCAAAGGAAAACTACCATGCTTCCTTCTAGACATCAACGCAATTTTTGACGTGATACCAGCAGATATGGTAGTGAATGCAATAATAACTACCTTGGTGGCTCATGCAAATCAACCTTGTGATAATATTATATATCAAGTAGGTTCCTCTATTGCAAATCCAATAAGATACCACAATCTCAAAGACTACATCTATAGATATTTCAAGGCAAAACCATGGGTGAACAAAGAGGGAAATCCTGTAATGGTCGGCAAAGTTACTGTATTGGACACCATGACTAGCTTCCAGAGATACATGTTCATTCGTTACTTGCTTCCATTGAAGGGACTAGAGCTAGCCAATGTAGCCTTTTGTCAATATTTTCAAGGAATGTGTCTTGACATTAGAAGGAAGATCCATATAGTGATGCAATTGGTCGACCTTTACAAGCCCTACGTGTTCTTCAAAGGCGTATTTGATAATATGAACACAGAAAAGTTGCAAACAGCGGTCAGACAAGGTGAGGTAGAGATGGAATATTCGTTTTACTTTGACCCTAAAATGATTGATTGGGAAGACTACTTCATGAATATCCATATTCCTG 1453 0.3916 MELGSITDFLQNKNILVIGATGFLAKIFVEKVLRVQPNVKKLYLLLRATDAESASQRLHNEIMRKDLFRLLKENVGAKFNAFVSEKLTLVPGDISQEDLNLKDPILREEIYNQIHCIVNFAATTNFDERYDVALGINTFGVKHVLNFAKSCIKLKVLVHVSTAYVCGERGGLIVEDPCQLGVSLNGVPGLDIGMEKRVVEDKMNQLHEEGATEEDVKMAMKDLGMKRATLYGWPNTYVFTKAMGEMLVETLKKNMSVIIVRPTMITSTYKEPFPGWVEGVRTIDSVIVAYGKGKLPCFLLDINAIFDVIPADMVVNAIITTLVAHANQPCDNIIYQVGSSIANPIRYHNLKDYIYRYFKAKPWVNKEGNPVMVGKVTVLDTMTSFQRYMFIRYLLPLKGLELANVAFCQYFQGMCLDIRRKIHIVMQLVDLYKPYVFFKGVFDNMNTEKLQTAVRQGEVEMEYSFYFDPKMIDWEDYFMNIHIP 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01524 484 CDD FAR-N_SDR_e 13 362 - -
Gma11g01524 484 Pfam Male sterility protein 19 318 IPR013120 -
Gma11g01524 484 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 335 IPR036291 -
Gma11g01524 484 Gene3D - 7 382 - -
Gma11g01524 484 Pfam Male sterility protein 392 483 IPR033640 -
Gma11g01524 484 CDD FAR_C 391 480 IPR033640 -
Gma11g01524 484 PANTHER FATTY ACYL-COA REDUCTASE 2 484 - -
Gma11g01524 484 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 484 IPR026055 GO:0080019
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01524 Gma-Chr11 16187386 16191269 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01524 112 483 Acyl Lipid Metabolism Gene Families AT4G33790 57.796 9.55e-165 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01524 K13356 - gmx:100793197 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01524 11 16187386 16191269 Gma11g01524 11 16187386 16191269 ECH
Gma12g00777 12 7225730 7232406 Gma11g01524 11 16187386 16191269 GST
Gma13g02819 13 42735512 42740205 Gma11g01524 11 16187386 16191269 PCT
Gma12g01731 12 37850241 37854618 Gma11g01524 11 16187386 16191269 PCT
Gma11g01524 11 16187386 16191269 Gma13g02819 13 42735512 42740205 PCT
Gma11g01524 11 16187386 16191269 Gma12g01731 12 37850241 37854618 PCT