Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01731 ATGGAATTGGGAAGCATAATGCACTTCCTTCAAGATAAGACCATTTTAGTCACTGGTGCCACTGGCTTCCTCGCAAAAATTTTTGTGGAAAAAATATTGAGAGTTCAACCAAATGTGAAGAAACTTTACCTTCTTTTGAGAGCCAGAGATACTGAATCTGCTACTCAACGTTTACATGCTGAGATCATAGGGAAGGACTTATTTAGATTGCTGAAGGAAAAACTGGGTACAAGATTCAATTCCTTTGTGTCAGAAAAGTTGGCCGTAGTGCCTGGGGACATTTCTCAAGAGGACTTGAATTTGGAGGACCCAATTCTAGGGGAAGAGCTTTTCAATCAAACAGATGTTATAGTTAATTTAGCTGCAACAACTAACTTTGATGAAAGATATGATATTGCATTGAGTATAAATACATTAGGAGTTATGCACGTGTTGAGCTTCGCCAAAAAATGTGTCAAACTAAAAGTGCTAGTCCACGTATCAACAGCTTATGTATGTGGAGAAAGAGAAGGACTCATACTAGAGGATCCACATCACTTTGGTGTGTCACTAAATGGAGTGCCCGGACCAGACATTGATATGGAAAAGAAAAAGGTGGAGGACAAATTGAATCAGCTTAGAGTGGAAGGAGCCACAGAACATGATATTGAATTGGCCATGAAGGACTTGGGTACTCAAAGAGCAACCATGTATGGATGGCCAAACACGTACGTCTTTACAAAGGCAATGGGAGTAATGCTTGTAGGAACTACAAAGGGAAACATGAACGTTGTAATTGTACGTCCCACAATGGTTACTAGCACTTACAAAGAACCTTTCCCTGGTTGGATTGAAGGTTTAAGAACCATAGACAGCATAGTTGTTGCTTATGGTAAAGGAAAACTAGTATGCTTCCTTGCGAATCTTGAGGCAGTTTTTGACGTGATACCGGCTGACATGGTGGTGAATGCAATGCTAGTGGCCATGGTGGCTCATGCAAATCAACCTAGTGATATCATATATCATTTGGGTTCCTCTGTTGTAAATCCAGTTATGTACCTTAATCTTCGAGACTATAGTGTAAGATATTTCACAGAAAAACCTTGGATAAACAGGGATGGAAAGCCCGTCAAGGTTGGCAAATTTACCATATTGAGAAACATGGATAGCTTCCGCAAATATATGTACATTCGTTACCTGCTTCCCTTAAAGGGACTAGAGCTTGTCAATGCAGCTTCATGCCAGTATTTTCAGAAAATGTATCTTGACTTCAATCGAAGATCCGTACTGTCTTGCGATTGGTTGAACTTTACAAGCCTTACTTGTTCTTCAATGGGGTATTTGATAATACGAATACAGAAAAGTTATTATCATCGGCAAGACAAGGTGGGGTAG 1374 0.3996 MELGSIMHFLQDKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRARDTESATQRLHAEIIGKDLFRLLKEKLGTRFNSFVSEKLAVVPGDISQEDLNLEDPILGEELFNQTDVIVNLAATTNFDERYDIALSINTLGVMHVLSFAKKCVKLKVLVHVSTAYVCGEREGLILEDPHHFGVSLNGVPGPDIDMEKKKVEDKLNQLRVEGATEHDIELAMKDLGTQRATMYGWPNTYVFTKAMGVMLVGTTKGNMNVVIVRPTMVTSTYKEPFPGWIEGLRTIDSIVVAYGKGKLVCFLANLEAVFDVIPADMVVNAMLVAMVAHANQPSDIIYHLGSSVVNPVMYLNLRDYSVRYFTEKPWINRDGKPVKVGKFTILRNMDSFRKYMYIRYLLPLKGLELVNAASCQYFQKMYLDFNRRSVLSCDWLNFTSLTCSSMGYLIIRIQKSYYHRQDKVG 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01731 457 CDD FAR-N_SDR_e 13 361 - -
Gma12g01731 457 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 336 IPR036291 -
Gma12g01731 457 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 420 IPR026055 GO:0080019
Gma12g01731 457 Gene3D - 8 372 - -
Gma12g01731 457 Pfam Male sterility protein 17 318 IPR013120 -
Gma12g01731 457 PANTHER FATTY ACYL-COA REDUCTASE 2 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01731 Gma-Chr12 37850241 37854618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01731 7 397 Acyl Lipid Metabolism Gene Families AT5G22500 54.962 5.12e-155 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01731 K13356 - gmx:100805240 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01731 12 37850241 37854618 Gma12g01731 12 37850241 37854618 ECH
Gma13g02819 13 42735512 42740205 Gma12g01731 12 37850241 37854618 GST
Gma12g01731 12 37850241 37854618 Gma12g00777 12 7225730 7232406 PCT
Gma12g01731 12 37850241 37854618 Gma11g01524 11 16187386 16191269 PCT
Gma12g00777 12 7225730 7232406 Gma12g01731 12 37850241 37854618 PCT
Gma11g01524 11 16187386 16191269 Gma12g01731 12 37850241 37854618 PCT