Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00777 ATGGAGTTGGGAAGCATACTCCATTTTCTTCAGGACAAGAACATTTTGATCACTGGAGCCACTGGCTTTCTTGCCAAAGTTTTGTTGGAGAAGATATTGAGGGTCCAACCAAATGTTAAGAAGCTTTACCTTCTTCTAAGAGCTGCAGATGCCAAATCTGCCACTCATCGCTTGAACAATGAGATCATAGGGAAGGATTTGTTTAGGGTACTAAAGGAGAAATTGGGTGCAAATTTTAATTCCTTTGTCTCGAAAAAGTTGACTCTGGTACCCGGGGACATCTCTCGTGAAGACTTGGGATTGGAGGATTCCATTCTAAGGGAAGAGATTTATGATCAAACAGATGTCATTATTAACTTAGCTGCAACAACTAACTTTGATGAAAGGTATGATATATCGTTGGGTCTAAATACCTTTGGTGTTAAGTATGTCATCAACTTCGCCAAAAAATGTACCAAACTCGAGGTTCTTGTGCATGTATCAACAGCCTATGTATGTGGTGAGGGAGGCCGAGAAGGGCTCATATTAGAGAAACCATATCATTTGGGTGATTCACTGAATGGAGTGTCTGGATTAGACATTAATGCAGAAGAGAAAGTTGTGCGTGACAAATTAAGTGAGTTACAACAACTGGGGGCCACAGAAAAGGAAATTAAAGAGGTTATGAAGGACTTGGGCATTAGCAGGGCAAAGTTATATGGATGGCCAAACACATATGTATTCACCAAGGCAATGGGAGAGATGCTTGTGGAGCAACTAAAAGGAAACTTATCCGTTGTGACCATTCGTCCCACCATTGTTACCAGCACATTCAAAGAACCTTTCCCTGGTTGGGCTGAAGGTGTAAGAACCATTGACAGTTTAGCTGTAGCTTATGGGAAAGGAAAATTAACATGCTTCCTTGGAGATCTCAAAGCAATTGTTGATGCGATACCAGCTGACATGGTGGTGAATGCAATACTTGTGGCCATGGTGGCTCATGCAAATCATCCTAGTGATGATGTTATATATCATGTTGGTTCCTCTGTTAGAAGACCACTAAGATATGGCAATCTTCAAGAGTATGGCTTTAGATATTTCACAGCAAAACCATGCATAAACAAGGATGGAAGGCCAGTTAAGGTTGGAAAAGTTACAGTGTTGAGCAACATGGATAGCTTCAGAAGATATATGTTCATTCGCTACCTGCTTGTGTTAAAGGGACTTGAGCTGGCCAATACTGCATTTTGCCAGTATTTCCAAGGAACATATCTTAATCTCAATAGGAAGATTCAGATTGTGATGCGGTTGGTGGACCTTTACAAGCCTTACTTGTTCTTTAAAGCTGCATTTGATGATATGAACACAGAGAAGTTGAGAATGGCAGCAAGACAAGGTGGGGTGGAGACAGATTTGTTTTATTTTGACCCCGAACTGATTGATTGGGAAGATTACTTTTTGAACATCCATCTTCCTGGTGTGGTGAAGTACATTTTGAAGTGA 1482 0.4089 MELGSILHFLQDKNILITGATGFLAKVLLEKILRVQPNVKKLYLLLRAADAKSATHRLNNEIIGKDLFRVLKEKLGANFNSFVSKKLTLVPGDISREDLGLEDSILREEIYDQTDVIINLAATTNFDERYDISLGLNTFGVKYVINFAKKCTKLEVLVHVSTAYVCGEGGREGLILEKPYHLGDSLNGVSGLDINAEEKVVRDKLSELQQLGATEKEIKEVMKDLGISRAKLYGWPNTYVFTKAMGEMLVEQLKGNLSVVTIRPTIVTSTFKEPFPGWAEGVRTIDSLAVAYGKGKLTCFLGDLKAIVDAIPADMVVNAILVAMVAHANHPSDDVIYHVGSSVRRPLRYGNLQEYGFRYFTAKPCINKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLKGLELANTAFCQYFQGTYLNLNRKIQIVMRLVDLYKPYLFFKAAFDDMNTEKLRMAARQGGVETDLFYFDPELIDWEDYFLNIHLPGVVKYILK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00777 493 Pfam Male sterility protein 17 320 IPR013120 -
Gma12g00777 493 Gene3D - 8 373 - -
Gma12g00777 493 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 492 IPR026055 GO:0080019
Gma12g00777 493 PANTHER FATTY ACYL-COA REDUCTASE 2 492 - -
Gma12g00777 493 CDD FAR-N_SDR_e 13 364 - -
Gma12g00777 493 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 339 IPR036291 -
Gma12g00777 493 CDD FAR_C 417 492 IPR033640 -
Gma12g00777 493 Pfam Male sterility protein 395 493 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00777 Gma-Chr12 7225730 7232406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00777 113 492 Acyl Lipid Metabolism Gene Families AT4G33790 60.263 6.25e-178 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00777 K13356 - gmx:100798338 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00777 12 7225730 7232406 Gma12g00777 12 7225730 7232406 ECH
Gma12g00777 12 7225730 7232406 Gma11g01524 11 16187386 16191269 GST
Gma13g02819 13 42735512 42740205 Gma12g00777 12 7225730 7232406 PCT
Gma12g01731 12 37850241 37854618 Gma12g00777 12 7225730 7232406 PCT
Gma12g00777 12 7225730 7232406 Gma13g02819 13 42735512 42740205 PCT
Gma12g00777 12 7225730 7232406 Gma12g01731 12 37850241 37854618 PCT