Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02804 ATGCCCAAGAACATCAGATCAGCAATGGCAACCTCTTCTTTCTTCTTCACCTTGCTATTACTGCTTCTCACTGTTTCAGATTTGTTTGTGCAAAGCCGTGGCCTTAATTTTGGAATCAACTACGGGCAAATAGCCAACAACCTTCCATCTCCATCTCGTGTGGCTGTTCTAATAAAATCTCTGAATGTATCCAGAATCAAACTCTATGATGCTGATCCAAATGTTCTATCTGCATTCTCCAATTCAGATGTGGAATTCATCATAGGACTAGGGAACGAGTATCTGCAGAGCATGAGAGACCCTTCTAAGGCTCAGAGCTGGGTTCAACAGCATGTTCAGCCTTACATTTCACAAACCAGAATCACTTGCATCACTGTAGGAAATGAGGTATTCAACTACAATGATACACAGCTCACAGCAAATCTTCTCCCAGCAATGCAAAGTGTGTATAATGCCCTTGTTAATCTAGGACTAGCACAACAAGTTACTGTTACGACTGCTCATTCTTTCAACATTTTAGCCAATTCTTTTCCTCCTTCATCTGGGGCATTCAGGCAAGATCTGATACAATACATTCAACCCCTCCTTAGCTTTCATGCTCAAATCAAATCACCCTTCCTCATTAATGCATATCCCTTTTTTGCATACAAGGACAATCCAAACCAAATCTCCTTGAACTATGTGCTATTTCAGCCAAATCAAGGGGCCACTGATCCAAACACCAATTTGCATTATGATAACATGTTGTATGCTCAGATTGATGCTGTCTACGCCGCCATCAAAGCGCTGGGACATACCGATGTTGAAGTCAGGATTTCAGAAACTGGTTGGCCTTCTAAGGGTGACCCTGATGAGGTTGGAGCCACACCCCAGAATGCAGAAATATATAATAGTAATTTATTGAAGAGGATAGAGCAGAAGCAAGGCACTCCTGCTAATCCATCTGTTCCAATTGATATTTTTGTCTTTGCACTTTTCAATGAGAATTTGAAGCCTGGTCCTGTTTCTGAGAGAAACTATGGCCTTTATTATCCTGATGGTACCCCAGTTTATAACATTGGATTAGAAGGTTATCTCCCAGAAATGGTTATAGAGTCCAAATCTAACGCTTTGTCCACCAATTTTCTCATCTACATATTTACATGTTTGTTGTTCATTTGGGAGCTTTCAAGACCGTGA 1179 0.4097 MPKNIRSAMATSSFFFTLLLLLLTVSDLFVQSRGLNFGINYGQIANNLPSPSRVAVLIKSLNVSRIKLYDADPNVLSAFSNSDVEFIIGLGNEYLQSMRDPSKAQSWVQQHVQPYISQTRITCITVGNEVFNYNDTQLTANLLPAMQSVYNALVNLGLAQQVTVTTAHSFNILANSFPPSSGAFRQDLIQYIQPLLSFHAQIKSPFLINAYPFFAYKDNPNQISLNYVLFQPNQGATDPNTNLHYDNMLYAQIDAVYAAIKALGHTDVEVRISETGWPSKGDPDEVGATPQNAEIYNSNLLKRIEQKQGTPANPSVPIDIFVFALFNENLKPGPVSERNYGLYYPDGTPVYNIGLEGYLPEMVIESKSNALSTNFLIYIFTCLLFIWELSRP 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02804 392 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 371 IPR044965 GO:0004553|GO:0005975
Gma13g02804 392 Pfam Glycosyl hydrolases family 17 38 353 IPR000490 GO:0004553|GO:0005975
Gma13g02804 392 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 13 371 - -
Gma13g02804 392 SUPERFAMILY (Trans)glycosidases 37 353 IPR017853 -
Gma13g02804 392 Gene3D Glycosidases 36 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02804 Gma-Chr13 42590271 42595383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02804 87 387 Glycoside Hydrolase AT2G27500 66.887 1.92e-158 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02804 - - gmx:100786020 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02804 13 42590271 42595383 Gma13g02804 13 42590271 42595383 ECH
Gma13g02804 13 42590271 42595383 Gma12g01747 12 38078273 38082622 GST
Gma13g02804 13 42590271 42595383 Gma12g00798 12 7443380 7448724 PCT
Gma13g02804 13 42590271 42595383 Gma11g01505 11 15892678 15896613 PCT
Gma12g00798 12 7443380 7448724 Gma13g02804 13 42590271 42595383 PCT
Gma11g01505 11 15892678 15896613 Gma13g02804 13 42590271 42595383 PCT