Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01747 atgtgtgtgtgtgtgtgtgtgtgtaatgtaataacttggctatGTGGCAAACCTTGGACCTTAAGGCTGGAAGCGTGGTGTTGGTCTTGGTTGGCGGTTATGCCCAATATCAGATCAGTAATGGCAACAACCTCTTCTTTCTTCTTCACTTTGCTATTGCTGCTTCTCACTGTTTCGGATTTGTTTGTGCAAAGCCGAGGCCTAAATTTTGGAATCAACTACGGGCAAAAGGCCAACAACCTTCCATCTCCATCCCGTGTGGCTGTTCTTATAAAATCTCTGAATGTCTCCAGAATCAAACTCTATGATGCTGATCCAAATGTTCTATCTGCATTCTCCAATTCAGATGTGGAATTCATCATAGGGCTAGAGAACGAGAAACTGCAGAGCATGACAGACCCTTCTAAGGCTCAGAGCTGGGTTCAACAGAATGTTCAACCTTACATTTCACAAACCAGAATCACTTGCATCACTGTAGGAAACGAGGTCTTCAACTACAATGATACTCAGCTCACAGAAAATCTTCTCCCTGCAATGCAAAGTGTGTATAATGCCCTTGTTAATCTAGGACTAGCACAACAAGTTACTGTTACAACTGCTCATTCTTTCAACATTTTAGCCAATTCTTTCCCTCCTTCATCTGGGGCATTCAGGCAAGATCTGATACAATACATTCAACCCCTCCTTAGCTTTCATGCTCAAATCAAATCACCCTTCCTCATTAATGCATATCCATTTTTTGCATACAAGGACAATCCAAACCAAATCTCCTTAAAATATGTGCTGTTTCAGCCAAATCAAGGGGCCACTGATCCAAATACCAATTTGCTTTATGATAACATGTTGTATGCTCAAATTGATGCTGTCTACGCGGCCATCAAAGCGCTGGAGCATACCGATATAGAAGTGAGGATTTCGGAAACCGGTTGGCCTTCTAAGGGTGACCCTGATGAGGTTGGAGCCACACCACAGAATGCAGAAATATATAATAGTAATTTGTTGAAGAGGATAGAGCAGAAGCAAGGCACTCCTGCAAATCCATCTGTTCCAATTGATATTTTTGTATTTGCACTTTTCAATGAGAATTTGAAGATTGGTCCTGTTTCTGAGAGAAACTACGGCCTTTATTATCCTGATGGTACCCCAGTTTACAACATTGGATTACAAGGTTATCTCCCAGTCCCAGAAATGGTTATGGAGTCCAAATCTAATGCTTTGTCCATCAATTTTCTCATCTACATATTTACATATCATTCTTTTGCAATAGGAGTTGTTAAAAGGGAGACAAGGGCAAGGCAAATTCTACACATTTTCTACACAGCCATGGGAGCAGTTGTTCGAGGACTAGTTCGTATTTTGCCTAAATCTAGTTTGTAG 1377 0.3994 MCVCVCVCNVITWLCGKPWTLRLEAWCWSWLAVMPNIRSVMATTSSFFFTLLLLLLTVSDLFVQSRGLNFGINYGQKANNLPSPSRVAVLIKSLNVSRIKLYDADPNVLSAFSNSDVEFIIGLENEKLQSMTDPSKAQSWVQQNVQPYISQTRITCITVGNEVFNYNDTQLTENLLPAMQSVYNALVNLGLAQQVTVTTAHSFNILANSFPPSSGAFRQDLIQYIQPLLSFHAQIKSPFLINAYPFFAYKDNPNQISLKYVLFQPNQGATDPNTNLLYDNMLYAQIDAVYAAIKALEHTDIEVRISETGWPSKGDPDEVGATPQNAEIYNSNLLKRIEQKQGTPANPSVPIDIFVFALFNENLKIGPVSERNYGLYYPDGTPVYNIGLQGYLPVPEMVMESKSNALSINFLIYIFTYHSFAIGVVKRETRARQILHIFYTAMGAVVRGLVRILPKSSL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01747 458 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 46 407 - -
Gma12g01747 458 Gene3D Glycosidases 69 391 - -
Gma12g01747 458 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 46 407 IPR044965 GO:0004553|GO:0005975
Gma12g01747 458 Pfam Glycosyl hydrolases family 17 71 386 IPR000490 GO:0004553|GO:0005975
Gma12g01747 458 SUPERFAMILY (Trans)glycosidases 70 386 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01747 Gma-Chr12 38078273 38082622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01747 120 408 Glycoside Hydrolase AT2G27500 68.276 7.85e-151 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01747 - - gmx:100811467 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01747 12 38078273 38082622 Gma12g01747 12 38078273 38082622 ECH
Gma13g02804 13 42590271 42595383 Gma12g01747 12 38078273 38082622 GST
Gma12g01747 12 38078273 38082622 Gma12g00798 12 7443380 7448724 PCT
Gma12g01747 12 38078273 38082622 Gma11g01505 11 15892678 15896613 PCT
Gma12g00798 12 7443380 7448724 Gma12g01747 12 38078273 38082622 PCT
Gma11g01505 11 15892678 15896613 Gma12g01747 12 38078273 38082622 PCT