Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01505 ATGGCCATGATGATCAGATCAGTAATGACAAGTTGTTCCTTCTTCATATCAATGCTTTTGTTTCTTTTCACCATTTCAGATTTGTTTGTGCAAATCCATGGCCTTGGTTTTGGAATCAACTACGGACAGATAGGCAACAATTTACCTCCTCCATCTCAAGTTGCTGTTCTTATAAAATCTATGAATGTGAGTAGGATCAGGCTCTATGATTCTGATCCAAATGTTCTACTAGCCTTCTCTCAATCCAATGTGGAATTCGTAATAGGACTTGGAAATGACTACCTAGAGAACATGACAAACCCTTCTAAATTTCAAACATGGATTCAGCAGCATGTTCAACCTTACCTCTCTCAGACCAAAATCACTTGCATCACAGTGGGAAATGAGGTGTTCAATAGCAATGATACTCAGCAAATGTTGAATCTTCTCCCAGCAATGCAAAGTGTGCATGATGCCCTTGTTAATCTTGGACTAGACAAACATGTAACCGTCACAACCGCCCATTCATTCAACATATTATCCAATTCCTACCCTCCTTCATCCGGGGCATTTAGGGAAGATCTTGTGCAATATATCCAACCCCTTCTTGACTTTCATGCTCAAATCAACTCACCTTTCCTCATCAATGCATACCCTTTCTTTGCATACAAAGATAACCCAGGCGAAGTTTCCTTAAACTATGTGCTTTTTCAGCCAAGTGAAGGCATGATTGATCAAAACACCAATTTGCATTATGACAACATGTTGTATGCTCAAATTGATGCTGTCTATGCTGCCATCAAACAAATGGGGCATGACCATGATGTTCAAGTTAGGATTTCCGAGACCGGTTGGCCTTCTAATGGTGATCCGGACGAGGTTGGAGCTACACCGCAGAATGCAGCTTTGTATAATGGTAACTTGATCAAAAGGATACAGCAGAAACAAGGCACTCCTGCAAAACCATCTGTTCCAATTGACATATATGTCTTTGCACTTTTTAATGAGAATTTGAAGCCTGGTCCAGCATCAGAGAGAAACTATGGACTTTACTATCCTGATGGTACTCCAGTTTATAACATTGGATTGAAGGATTATCTCCAAGAGATTCCTATGGCAGCTAAATCCAATACTTTGTCTGTCAATTTTCTTGTATGTATAACTACATGCTTGATCTTTGCTTTGGAGCCTTCAAGATGGTGA 1182 0.4002 MAMMIRSVMTSCSFFISMLLFLFTISDLFVQIHGLGFGINYGQIGNNLPPPSQVAVLIKSMNVSRIRLYDSDPNVLLAFSQSNVEFVIGLGNDYLENMTNPSKFQTWIQQHVQPYLSQTKITCITVGNEVFNSNDTQQMLNLLPAMQSVHDALVNLGLDKHVTVTTAHSFNILSNSYPPSSGAFREDLVQYIQPLLDFHAQINSPFLINAYPFFAYKDNPGEVSLNYVLFQPSEGMIDQNTNLHYDNMLYAQIDAVYAAIKQMGHDHDVQVRISETGWPSNGDPDEVGATPQNAALYNGNLIKRIQQKQGTPAKPSVPIDIYVFALFNENLKPGPASERNYGLYYPDGTPVYNIGLKDYLQEIPMAAKSNTLSVNFLVCITTCLIFALEPSRW 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01505 393 Pfam Glycosyl hydrolases family 17 38 354 IPR000490 GO:0004553|GO:0005975
Gma11g01505 393 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 370 IPR044965 GO:0004553|GO:0005975
Gma11g01505 393 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 13 370 - -
Gma11g01505 393 SUPERFAMILY (Trans)glycosidases 37 355 IPR017853 -
Gma11g01505 393 Gene3D Glycosidases 36 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01505 Gma-Chr11 15892678 15896613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g01505 87 387 Glycoside Hydrolase AT2G27500 65.563 6.73e-152 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01505 - - gmx:100781332 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01505 11 15892678 15896613 Gma11g01505 11 15892678 15896613 ECH
Gma12g00798 12 7443380 7448724 Gma11g01505 11 15892678 15896613 GST
Gma13g02804 13 42590271 42595383 Gma11g01505 11 15892678 15896613 PCT
Gma12g01747 12 38078273 38082622 Gma11g01505 11 15892678 15896613 PCT
Gma11g01505 11 15892678 15896613 Gma13g02804 13 42590271 42595383 PCT
Gma11g01505 11 15892678 15896613 Gma12g01747 12 38078273 38082622 PCT