Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00798 ATGGCCATAATGATCAGATCAGTAATGACAGGCTTTTCCTTCTTCATATCAATGCTTTTGTTTCTTCTCACCATTTCAGATTTGTTTGCGCGAATCCATGGCCTTGGTTTTGGAATCAACTACGGACAGATAGGCAACAATTTGCCTCTTCCCTCTCAAGTGGCTGTTCTTATAAAATCTATGAATGTGAGTAGGATCAAGCTCTATGATGCTGATCCAGATGTTCTACAAGCCTTCTCTCAGTACAATGTGGAATTCATTATAGGACTTGGAAATGAGTACCTAGAGAACATGACAAACCCTTATAAAGCTCAAACTTGGATTCAGCAGCATGTTCAACCTTACCTTTCACAGACTAAAATCACTTGCATCACTGTGGGAAATGAGGTGTTCAATAGCAATGATACTCAGCAAATGTTGAACCTTCTCCCAGCAATGCAAACTGTGCATGATGCCCTTGTTAATCTTGGACTAGACCAACAAGTAACCGTCACAACCGCGCATTCCTTCAACATATTATCCAATTCCTACCCTCCTTCGTCCGGAGCTTTTAGGGAAGATCTTGTGCAATATATCCAAGCCCTTCTTGACTTTCATGCTCAAATCAACTCACCTTTTCTTATCAATGCATACCCTTTCTTTGCATACAAAGACAACCCGGATGAGGTTTCCTTAAACTATGTGCTTTTTCAGCCGAATGAAGGCATGGCTGATCCAAACACCAATTTCCATTATGACAACATGTTGTATGCTCAAATTGATGCTGTCTATGCTGCCATCAAACAAATGGGGCATGATGATGTTCAAGTAAGGATTTCTGAGACCGGTTGGCCTTCTAATGGTGATCCTGAAGAGGTTGGAGCTACACCGCAGAACGCCGCATTGTATAATGGTAACTTGATCAAAAGGATAGAGCAGAAACAAGGCACTCCTGCAAAACCATCGGTTCCAATTGACATATATGTCTTTGCACTTTTTAATGAGAATTTGAAGCCTGGTCCAGCATCAGAGAGAAACTATGGACTTTACTATCCTAATGGTTCTCCAGTTTATAACATTGGATTGAAGGGTTATCTCCCAGAGATGCCTTTGGCAGCTAAATCCAATACTTTGTCTGTCAATTTTCTTTTATTCAAGAAAGGTTCTGCCTTAATATCAATTCGTGCATGCCACAAGTGGACTCTGGTGCCGACCTTAACCACCCCAAGAAAGCCTTCATTACTCTTTTTGAATATTAAAATATGGGAGAAGGAAACTAAAGCAGCACAACTTTCTTTTCATTTGCCCAAGGAAAATCCTACACTTCGCATGATGTCCCTTCTCCTTTCGTCGCTTTGCCTCTTGCTGTCGACCCAAAAGAGTGTAGCACCGCCTCCGCTTTCGTCTTTGCCACAACCTTCCTACACAACCGGAATTGCCACCTCACCTAATGACAACAACCGTCTCATCACCGTCATCGATAACAATGCGTTGATGAAGGTAAAGAAGAAGATCGACAACACTCGATTGAGGATGAGACGGTACTATGTAAAGTTAATTTTTTAA 1545 0.4155 MAIMIRSVMTGFSFFISMLLFLLTISDLFARIHGLGFGINYGQIGNNLPLPSQVAVLIKSMNVSRIKLYDADPDVLQAFSQYNVEFIIGLGNEYLENMTNPYKAQTWIQQHVQPYLSQTKITCITVGNEVFNSNDTQQMLNLLPAMQTVHDALVNLGLDQQVTVTTAHSFNILSNSYPPSSGAFREDLVQYIQALLDFHAQINSPFLINAYPFFAYKDNPDEVSLNYVLFQPNEGMADPNTNFHYDNMLYAQIDAVYAAIKQMGHDDVQVRISETGWPSNGDPEEVGATPQNAALYNGNLIKRIEQKQGTPAKPSVPIDIYVFALFNENLKPGPASERNYGLYYPNGSPVYNIGLKGYLPEMPLAAKSNTLSVNFLLFKKGSALISIRACHKWTLVPTLTTPRKPSLLFLNIKIWEKETKAAQLSFHLPKENPTLRMMSLLLSSLCLLLSTQKSVAPPPLSSLPQPSYTTGIATSPNDNNRLITVIDNNALMKVKKKIDNTRLRMRRYYVKLIF 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00798 514 SUPERFAMILY (Trans)glycosidases 37 353 IPR017853 -
Gma12g00798 514 Gene3D Glycosidases 36 359 - -
Gma12g00798 514 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 12 369 - -
Gma12g00798 514 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 12 369 IPR044965 GO:0004553|GO:0005975
Gma12g00798 514 Pfam Glycosyl hydrolases family 17 38 353 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00798 Gma-Chr12 7443380 7448724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00798 87 373 Glycoside Hydrolase AT2G27500 67.708 2.79e-153 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00798 - - gmx:100818948 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00798 12 7443380 7448724 Gma12g00798 12 7443380 7448724 ECH
Gma12g00798 12 7443380 7448724 Gma11g01505 11 15892678 15896613 GST
Gma13g02804 13 42590271 42595383 Gma12g00798 12 7443380 7448724 PCT
Gma12g01747 12 38078273 38082622 Gma12g00798 12 7443380 7448724 PCT
Gma12g00798 12 7443380 7448724 Gma13g02804 13 42590271 42595383 PCT
Gma12g00798 12 7443380 7448724 Gma12g01747 12 38078273 38082622 PCT