Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02802 ATGACCGAGGTCCTCCACTCCTCATCCCCACCCCATTTTGTTGCTTCTTCATCACCGCCAACAAAGACAAGGACAACAACCACTACAACAACAACCTCTTCATTCTCTTCTCACAATAATGCCTTTCTCCTCCGACCTCTCTTGGCTCTTCTTCTGACCCTTCTCAGGAAATCCTTCCAGCTTTCTCGCAGAAACATCTGCTCCATTATTATGAACATTGGTTCCCCAACTAACGTGCGCCATGTTGCGCATGTCACCTTTGATAGGTTCAACGGTTTCTTGGGCTTGCCTGTTGAGTTTGAACCTGAAGTCCCAAGAAGGCCTCCTAGTGCTAGTGCATCTGTTTTTGGAGTTTCAACAGAATCCATGCAGTTATCACATGACTCAAGAGGGAACAGTGTGCCAACAATTCTGCTGTTGATGCAAAAGCATTTGTATGTTCAAGGAGGTTTGCAGGTAGAGGGGATTTTCAGAATTAACGCGGACAATGGTCAAGAGGAACATGCTAGGGATCAATTGAATTTGGGAGTGGTCCCAGAAGGCATCGATGTACATTGTCTGGCAGGGCTAATTAAGGCTTGGTTTAGGGAACTTCCTACAGGCATTCTGGATTCATTATCTCCGGAGCAAGTAATGCAATGCCAGACTGAGGATGAATGTGCTGAACTAGTGAGACATCTACCTCATACTGAAGCTTCACTCTTGGACTGGGCCATCAATCTGATGGCTGATGTTGTCCAACATGAAAATGTAAATAAGATGAATGCGCATAACGTTGCCATGGTTTTTGCACCAAACATGACTCAGATGGCAGACCCTATATCTGCATTGATGTATGCAGTTCAAGTAATGAACTTCTTGAAGACACTTATATTAAGGACAGTACGGGAAAGAAAGGATTCTGTGGTAGAATCTTATCCTAGATTTTATTTGCAACCTTCTGTTGATAATGAAAACCATTCACTTTTGGAGTCCTTCCAGCAAGATACTCCAGCAGAAAATAAAGAGGCTCAAGAAAACTTTGTTTTAGAGAAAACTGCCTTAGATCGTTCCCCTGAATCACTCCAAAACAACTCCACTAGAGCAGAGCCTGGCAGTTTGACAAACTCTTCTGAGAATCTTGTTTCCAATGAGGATTTGTATTGTGAGTTTCCACCCGTAGGAAACATGGGGAAGAGTAAAACTGGCCAATCAAGTAAGTCAAATGCTAGAAAAGAGTCCAAAAAGACAAGAGGCAGCAACCTGTGA 1248 0.4343 MTEVLHSSSPPHFVASSSPPTKTRTTTTTTTTSSFSSHNNAFLLRPLLALLLTLLRKSFQLSRRNICSIIMNIGSPTNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRPPSASASVFGVSTESMQLSHDSRGNSVPTILLLMQKHLYVQGGLQVEGIFRINADNGQEEHARDQLNLGVVPEGIDVHCLAGLIKAWFRELPTGILDSLSPEQVMQCQTEDECAELVRHLPHTEASLLDWAINLMADVVQHENVNKMNAHNVAMVFAPNMTQMADPISALMYAVQVMNFLKTLILRTVRERKDSVVESYPRFYLQPSVDNENHSLLESFQQDTPAENKEAQENFVLEKTALDRSPESLQNNSTRAEPGSLTNSSENLVSNEDLYCEFPPVGNMGKSKTGQSSKSNARKESKKTRGSNL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02802 415 MobiDBLite consensus disorder prediction 1 35 - -
Gma13g02802 415 Pfam P21-Rho-binding domain 73 99 IPR000095 -
Gma13g02802 415 ProSiteProfiles Rho GTPase-activating proteins domain profile. 123 299 IPR000198 GO:0007165
Gma13g02802 415 SMART PBD_5 73 107 IPR000095 -
Gma13g02802 415 Gene3D Rho GTPase activation protein 106 302 IPR008936 GO:0007165
Gma13g02802 415 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 1 399 - -
Gma13g02802 415 CDD RhoGAP 135 291 - -
Gma13g02802 415 SUPERFAMILY GTPase activation domain, GAP 113 292 IPR008936 GO:0007165
Gma13g02802 415 SMART RhoGAP_3 132 295 IPR000198 GO:0007165
Gma13g02802 415 Gene3D CRIB domain 70 103 IPR036936 -
Gma13g02802 415 MobiDBLite consensus disorder prediction 399 415 - -
Gma13g02802 415 MobiDBLite consensus disorder prediction 350 377 - -
Gma13g02802 415 MobiDBLite consensus disorder prediction 346 415 - -
Gma13g02802 415 Pfam RhoGAP domain 135 269 IPR000198 GO:0007165
Gma13g02802 415 ProSiteProfiles CRIB domain profile. 73 86 IPR000095 -
Gma13g02802 415 PANTHER MKIAA1688 PROTEIN 1 399 IPR044785 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02802 Gma-Chr13 42574704 42578225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02802 - K20642 gmx:100798012 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02802 13 42574704 42578225 Gma12g01749 12 38093763 38097497 GST
Gma13g02802 13 42574704 42578225 Gma12g00803 12 7513757 7517550 PCT
Gma13g02802 13 42574704 42578225 Gma11g01500 11 15827681 15831586 PCT
Gma12g00803 12 7513757 7517550 Gma13g02802 13 42574704 42578225 PCT
Gma11g01500 11 15827681 15831586 Gma13g02802 13 42574704 42578225 PCT