Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01749 ATGACCGAGGTCCTCCACTCCTCCCCACCTCGTTTTGTTGCTTCATCACCACcaacaaagacaaggacaacaacaacaacaacaacaacaaagacaaggacaacaacaccaacaacCTCTTCATTCTCTTCTCCCAATGCCTTTCTCCTCCGACCTCTCTTGGCGCTTCTTCTGACCCTTCTCAGGAAATCCTTCCAGCTTCCTCGCAAAAACATCGGCTCCATTATGGACATTGGCTCCCCAACGAACGTGCGCCATGTTGCGCATGTCACCTTTGATAGGTTCAATGGTTTCTTGGGCTTGCCTGTTGAGTTTGAACCTGAGGTCCCCAGAAGGCCTCCTAGTGCTAGTGCATCTGTTTTTGGAGTTTCAACAGAATCCATGCAGTTGTCGTATGACTCAAGAGGGAACAGTGTGCCAACAATACTGCTGTTGATGCAAAGGCATCTGTATGTTCAAGGAGGGTTGCAGgtggaggggattttcagaattaacgcggacaatggtcaagaggaacatgttagggatcaattgaatttgggagtggtcccagaaggcattgatgtacattgtttggcagggctaattaaggcttggtttagggaacttcctacaggcattctagattcattatcacccgagcaggtaatgcaatgccagactgaggatgaatgttctgaactagtgagacatctacctcatactgaagcttcactcttggactgggccatcaatctgatggctgatgttgtcctacatgagcatgttaataagatgaatgcgcgtaacattgccatggtttttgcaccaaacatgactcagATGGCAGACCCTATATCTGCATTGATGTATGCAGTTCAAGTAATGAACTTCTTGAAGACACTTATATTAAGGACAGTGCGGGAAAGAAAGGATTCTGTGGTAGAATCATGTCCTAGATTTTATCTACAACCTTCTGTAGATAATGAAAACCGTAGAATTTTGGAGTCCTTCCGGCAAGATACTCCTGCAGAAAATGAAGAGGCTCAAGAAAACTTTGTTTTAGAGAAAACTGCCTTAGACCGTTCCCCTGAATCACTCCAAAACAACTCAACTGGAGGAGAACCTGGCAGTTTGACAAACTCTTCTGAGAATCTTGTTTGCAATGAGGATTTGTATTGTGAGTTTCCACCCGTAGGAAACATGGGGAAGAGTAAAACTGGCCAATCAAGTAAGTCAAATGCTAGAAAAGAGTCCAAAAAGACAAGAGGCAGCAACCTGTGA 1263 0.3032 MTEVLHSSPPRFVASSPPTKTRTTTTTTTTKTRTTTPTTSSFSSPNAFLLRPLLALLLTLLRKSFQLPRKNIGSIMDIGSPTNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRPPSASASVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYVQGGLQVEGIFRINADNGQEEHVRDQLNLGVVPEGIDVHCLAGLIKAWFRELPTGILDSLSPEQVMQCQTEDECSELVRHLPHTEASLLDWAINLMADVVLHEHVNKMNARNIAMVFAPNMTQMADPISALMYAVQVMNFLKTLILRTVRERKDSVVESCPRFYLQPSVDNENRRILESFRQDTPAENEEAQENFVLEKTALDRSPESLQNNSTGGEPGSLTNSSENLVCNEDLYCEFPPVGNMGKSKTGQSSKSNARKESKKTRGSNL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01749 420 MobiDBLite consensus disorder prediction 12 43 - -
Gma12g01749 420 CDD CRIB 76 116 - -
Gma12g01749 420 ProSiteProfiles Rho GTPase-activating proteins domain profile. 123 304 IPR000198 GO:0007165
Gma12g01749 420 MobiDBLite consensus disorder prediction 391 420 - -
Gma12g01749 420 ProSiteProfiles CRIB domain profile. 78 91 IPR000095 -
Gma12g01749 420 MobiDBLite consensus disorder prediction 352 375 - -
Gma12g01749 420 MobiDBLite consensus disorder prediction 1 43 - -
Gma12g01749 420 SMART RhoGAP_3 137 300 IPR000198 GO:0007165
Gma12g01749 420 CDD RhoGAP 140 296 - -
Gma12g01749 420 SUPERFAMILY GTPase activation domain, GAP 118 297 IPR008936 GO:0007165
Gma12g01749 420 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 1 415 - -
Gma12g01749 420 MobiDBLite consensus disorder prediction 404 420 - -
Gma12g01749 420 SMART PBD_5 78 112 IPR000095 -
Gma12g01749 420 Gene3D CRIB domain 75 108 IPR036936 -
Gma12g01749 420 Pfam P21-Rho-binding domain 77 104 IPR000095 -
Gma12g01749 420 MobiDBLite consensus disorder prediction 355 375 - -
Gma12g01749 420 PANTHER MKIAA1688 PROTEIN 1 415 IPR044785 GO:0005096
Gma12g01749 420 Gene3D Rho GTPase activation protein 111 307 IPR008936 GO:0007165
Gma12g01749 420 Pfam RhoGAP domain 140 274 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01749 Gma-Chr12 38093763 38097497 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01749 - K20642 gmx:100776004 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01749 12 38093763 38097497 Gma12g01749 12 38093763 38097497 ECH
Gma13g02802 13 42574704 42578225 Gma12g01749 12 38093763 38097497 GST
Gma12g01749 12 38093763 38097497 Gma12g00803 12 7513757 7517550 PCT
Gma12g01749 12 38093763 38097497 Gma11g01500 11 15827681 15831586 PCT
Gma12g00803 12 7513757 7517550 Gma12g01749 12 38093763 38097497 PCT
Gma11g01500 11 15827681 15831586 Gma12g01749 12 38093763 38097497 PCT