Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00803 ATGACGGAGGTGCTCCATTTCTCATCCTCTTCGTCGCCAGCCACTTGTTCTTCTGATGGCATTCTCCAAGAAGCACCGCCACCACCACCACCTTCTTCTTCTGTGAGCGCGGTGGTGGACGGGTTTTCTACGGTCACCGACTGTGACGGGTGCGGGGTCACATTCACAGACAGAACGCAGCAGCAGGAGGAGGAGCTCTCTCTTCTGGCAATTCTTGTGACCCTCTTGAGGAAATCGCTTATTGCTTGCAACAAGAGCGAGGAGGGCCATGGCGCCATGGAGATTGGGTGGCCCACTAACGTGCGCCATGTGGCGCATGTCACCTTCGACAGGTTCAATGGCTTCTTGGGCTTGCCTCGTGAGTTCGAGCCCGAAGTCTCCACAAGACCTCCCAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACAGAATCCATGCAGTTATCATATGACACGAGAGGGAACAGTGTGCCAACCATACTGCTACTAATGCAAAGGCACTTGTATGCTCTCGGAGGGTTGCAGGAAGAGGGAATTTTCAGAATTAATGCAGATaatagtcaagaggagtctgttagggatcaattaaataggggattggtcccagaagatgttgatatacattgtttggcaggACAAATTAAGgcttggtttagggaactgcctactggtgttctggattctttatcaccagagcaagtaatgcaatgccagactgaagaggattgtactgaactggccggccagctacctcacactgaagcttcccttttggactgggctattaatctaatggctgatgttgcccaagaggaagacttgaataagatgaatgcacggaacatcgccatggtttttgcaccaaatatgactcatatggcagaccctttgactgcattgatgtatgcagttcaagtgatgaacttcctgaagaatcttatattaaggaccctGCGAGAAAGAAAGTATTGTGTCGTAGAATCGTCTCCTGGGTTTTGTTTAGAGCCTTCTGATGAGAATGGGGACCACAGTCTTTTGGAGTCCTGTCAGCAAGATGACATTGCCACTGAAAATGAAGAGGCCGGGGAAACCTTTGTTTACGAGAAAACTGAATTAGACTGTTCCCCTGAATCTCTCCAAAGCAAATATTCAACTGAAGGAGAATGTGGCAGTTTGATAGGCTCTCCTGAGAATCTGGTTTGTGAGGAGGACTTGTATTGTGAGTTTCCACCCAAAGGAAACATTGAGAAGAGTAAGAGTGGACAATCAAGTAATTCCAGTGCTAAAAAGGGGTCCAAAAGAACCAGAGGCCTGCTCCAACCTGTGATCCATGCAACAGTGGCTGTTGATAAAAAGGGTATTAGCAATCTTAGCCGCATAGATTCAAGATCAGAGCGGATAGAAGCCTGGCGGTGA 1413 0.3546 MTEVLHFSSSSSPATCSSDGILQEAPPPPPPSSSVSAVVDGFSTVTDCDGCGVTFTDRTQQQEEELSLLAILVTLLRKSLIACNKSEEGHGAMEIGWPTNVRHVAHVTFDRFNGFLGLPREFEPEVSTRPPSASATVFGVSTESMQLSYDTRGNSVPTILLLMQRHLYALGGLQEEGIFRINADNSQEESVRDQLNRGLVPEDVDIHCLAGQIKAWFRELPTGVLDSLSPEQVMQCQTEEDCTELAGQLPHTEASLLDWAINLMADVAQEEDLNKMNARNIAMVFAPNMTHMADPLTALMYAVQVMNFLKNLILRTLRERKYCVVESSPGFCLEPSDENGDHSLLESCQQDDIATENEEAGETFVYEKTELDCSPESLQSKYSTEGECGSLIGSPENLVCEEDLYCEFPPKGNIEKSKSGQSSNSSAKKGSKRTRGLLQPVIHATVAVDKKGISNLSRIDSRSERIEAWR 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00803 470 SUPERFAMILY GTPase activation domain, GAP 135 314 IPR008936 GO:0007165
Gma12g00803 470 MobiDBLite consensus disorder prediction 1 35 - -
Gma12g00803 470 CDD RhoGAP 157 313 - -
Gma12g00803 470 Pfam RhoGAP domain 157 291 IPR000198 GO:0007165
Gma12g00803 470 ProSiteProfiles CRIB domain profile. 95 108 IPR000095 -
Gma12g00803 470 SMART RhoGAP_3 154 317 IPR000198 GO:0007165
Gma12g00803 470 MobiDBLite consensus disorder prediction 415 432 - -
Gma12g00803 470 PANTHER MKIAA1688 PROTEIN 1 470 IPR044785 GO:0005096
Gma12g00803 470 SMART PBD_5 95 129 IPR000095 -
Gma12g00803 470 MobiDBLite consensus disorder prediction 1 19 - -
Gma12g00803 470 MobiDBLite consensus disorder prediction 415 438 - -
Gma12g00803 470 CDD CRIB 93 133 - -
Gma12g00803 470 ProSiteProfiles Rho GTPase-activating proteins domain profile. 140 321 IPR000198 GO:0007165
Gma12g00803 470 Gene3D Rho GTPase activation protein 127 321 IPR008936 GO:0007165
Gma12g00803 470 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 1 470 - -
Gma12g00803 470 Gene3D CRIB domain 91 126 IPR036936 -
Gma12g00803 470 Pfam P21-Rho-binding domain 94 121 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00803 Gma-Chr12 7513757 7517550 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00803 - K20642 gmx:100775644 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00803 12 7513757 7517550 Gma12g00803 12 7513757 7517550 ECH
Gma12g00803 12 7513757 7517550 Gma11g01500 11 15827681 15831586 GST
Gma13g02802 13 42574704 42578225 Gma12g00803 12 7513757 7517550 PCT
Gma12g01749 12 38093763 38097497 Gma12g00803 12 7513757 7517550 PCT
Gma12g00803 12 7513757 7517550 Gma13g02802 13 42574704 42578225 PCT
Gma12g00803 12 7513757 7517550 Gma12g01749 12 38093763 38097497 PCT