Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01500 ATGACGGAGGTGCTTCATTTCTCATCCTCTTCGTCGCCAGCCACTTCTTCTTCCGATGGCATTCTCCAAGAACCACCACCACCTTCTTCTGTGAGCGTGGTGGTGGATGGGTTTTCTACGGTCACCGACTGTGACGCGCGCAGGGTCACGGTCACCGACAGAACGCACCAAGAGCTTTCTCTTCTGGCAATTCTTGTGACCCTTTTGAGGAAATCGCTGATTGCTTGCAACAAGAGCGACGAGGGACAGGGCGCCATGGAGATTGGGTGGCCCACTAACGTGCGCCACGTGGCGCATGTCACCTTCGACAGGTTCAATGGCTTCTTGGGCTTGCCTCGTGAGTTCGAGCCCGAAGTCTCCACAAGGCCTCCCAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACAGAATCCATGCAGTTATCGTATGACACGAGAGGGAACAGTGTGCCAACCATACTGCTACTAATGCAAAGGCACTTGTATGCTCTCGGAGGGTTGCAGGCAGAGGGGATTTTCAGAATTAATGCAGATAATAGTCAAGAGGAGTATGTTAGGGATCAATTAAATAGGGGATTGGTCCCAGAAGATGTTGATATACATTGTTTGGCAGGACAAATTAAGGCTTGGTTTAGGGAACTGCCTACTGGTGTTCTGGATTCTTTATCACCAGAGCATGTAATGCAATGCCAGACTGAAGAGGATTGCGCTGAACTGGCCAGCCAGCTACCTCACACCGAAGCTTCCCTTTTGGACTGGGCTATTAATTTAATGGCTGATGTTGCCCAAGAGGAACACTTGAATAAGATGAATGCACGGAACATCGCCATGGTTTTTGCACCAAATATGACTCATATGGCAGATCCTTTGACTGCATTGATGTATGCAGTTCAAGTGATGAACTTCCTAAAGAATCTTATATTAAGGACACTGCGAGAGAGAAAGGATTGTGTGGTAGAATCGTCTCCTGGATTTTGTTTAGAGCCTTCTGATGAGAACGGGGACAGCAGTCTTCCGGAGTCCTGCCAGCAAGATGATGATGTTGCTGCTGAAAATGAAGAGGCCGGGGAAACCTTTGTTTCTGAGAAAACTGAATTAGAATGTTCGCCTGAGTCCCTCCAAAGCAAATATTCAACTGAAGGAGGATGTGGCAGTTTGATAGGCTCTCCTGAGAATCTGGTTTGTGAGGAGGACTTGTATTGTGAGTTTCCATCCAAAGGAAACATCGGGAAGAGTAAGAGTGTTCAATCAAGTAATTCCAGTTCTAAAAAGGGGTCCCAAAAAACCAGAGGCATGCTCCAACCTGTGATCCATGCAACAGTGGCTGCTGATAAAAAGGGTATTAGCAATCTGAGCCGCATAGATTCGAGATCAGAGCGGATAGAAGCCTGGCGGTGA 1395 0.4774 MTEVLHFSSSSSPATSSSDGILQEPPPPSSVSVVVDGFSTVTDCDARRVTVTDRTHQELSLLAILVTLLRKSLIACNKSDEGQGAMEIGWPTNVRHVAHVTFDRFNGFLGLPREFEPEVSTRPPSASATVFGVSTESMQLSYDTRGNSVPTILLLMQRHLYALGGLQAEGIFRINADNSQEEYVRDQLNRGLVPEDVDIHCLAGQIKAWFRELPTGVLDSLSPEHVMQCQTEEDCAELASQLPHTEASLLDWAINLMADVAQEEHLNKMNARNIAMVFAPNMTHMADPLTALMYAVQVMNFLKNLILRTLRERKDCVVESSPGFCLEPSDENGDSSLPESCQQDDDVAAENEEAGETFVSEKTELECSPESLQSKYSTEGGCGSLIGSPENLVCEEDLYCEFPSKGNIGKSKSVQSSNSSSKKGSQKTRGMLQPVIHATVAADKKGISNLSRIDSRSERIEAWR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01500 464 Pfam P21-Rho-binding domain 87 114 IPR000095 -
Gma11g01500 464 ProSiteProfiles CRIB domain profile. 88 101 IPR000095 -
Gma11g01500 464 ProSiteProfiles Rho GTPase-activating proteins domain profile. 133 314 IPR000198 GO:0007165
Gma11g01500 464 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 1 464 - -
Gma11g01500 464 MobiDBLite consensus disorder prediction 1 30 - -
Gma11g01500 464 MobiDBLite consensus disorder prediction 1 25 - -
Gma11g01500 464 SMART RhoGAP_3 147 310 IPR000198 GO:0007165
Gma11g01500 464 SMART PBD_5 88 122 IPR000095 -
Gma11g01500 464 Gene3D CRIB domain 83 119 IPR036936 -
Gma11g01500 464 SUPERFAMILY GTPase activation domain, GAP 128 307 IPR008936 GO:0007165
Gma11g01500 464 MobiDBLite consensus disorder prediction 408 428 - -
Gma11g01500 464 MobiDBLite consensus disorder prediction 405 433 - -
Gma11g01500 464 Pfam RhoGAP domain 150 284 IPR000198 GO:0007165
Gma11g01500 464 CDD CRIB 86 126 - -
Gma11g01500 464 MobiDBLite consensus disorder prediction 327 370 - -
Gma11g01500 464 Gene3D Rho GTPase activation protein 120 315 IPR008936 GO:0007165
Gma11g01500 464 PANTHER MKIAA1688 PROTEIN 1 464 IPR044785 GO:0005096
Gma11g01500 464 CDD RhoGAP 150 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01500 Gma-Chr11 15827681 15831586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01500 - K20642 gmx:100784019 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00803 12 7513757 7517550 Gma11g01500 11 15827681 15831586 GST
Gma13g02802 13 42574704 42578225 Gma11g01500 11 15827681 15831586 PCT
Gma12g01749 12 38093763 38097497 Gma11g01500 11 15827681 15831586 PCT
Gma11g01500 11 15827681 15831586 Gma13g02802 13 42574704 42578225 PCT
Gma11g01500 11 15827681 15831586 Gma12g01749 12 38093763 38097497 PCT