Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02786 ATGATTTCACCGCAAACTAAACAATCCTTCGGTTCACTCTTCCTCCTTTTCCTCGTGTTGTTGCAGAAGCGATTCGAAATGGGCGTGATCGTAGAAAACCCTAATAGTTCCAAGCCAATCGTGATCCGCGAGGTCTGGGCCTCCAACCTCGAATCCGAATTCGAGGTGATTCGTGAAGTGATCGATGATTACCCTTTCATCTCAATGGACACCGAATTTCCTGGCGTTGTTTTCCGCCCCCACGTGGTGGACCCCACAAAACCCTACCTCTTCCGCCTCCGCCCCTCCGACCACTACCGTTTCCTCAAGTTCAACGTTGACGCCCTAAACCTAATCCAGGTTGGTATCACTCTCTCCGACGCCGACGGTAATCTCCCTCACCTCGAAACCGGTAACCGCTTCATCTGGGAATTCAACTTTCGCGACTTCGACGTCGACCGTGACGACTACGCGTCGGACTCCATCGATCTCCTCCGCCGCCAGGGGATCGACTTCCGGCGCAACACGGCGGAAGGCATCGACTCTAACCTTTTCGCCGAACTGGTGATGTCTTCGGGACTCGTCTGCAATGACTCGGTGAGTTGGGTTACGTTTCACAGCGCGTACGATTTCGGGTACTTGGTTAAGATCCTGACCCGGCGGAACCTGCCAAACGGGTTGGAAGAGTTCTTGAAGATGTTGAGGGCGTTTTTCGGGAACAACGTTTATGACATCAAGCACATGATGCAGTTTTGTGATACTCTCTATGGCGGTCTGGACCGGCTCGCGCGAACCCTCAACGTGGACCGGGCCGTTGGGAAGTGCCACCAGGCCGGGTCCGATAGCCTGCTGACATGGCACGTGTTTCAGAAAATGAGGGATATTTATTTCGTGAAGGATGGACCCCATAAGCATGTCGGTGTTTTGTTTGGATTGGAACTCACTTGTTCTGCCCCTTGA 939 0.5314 MISPQTKQSFGSLFLLFLVLLQKRFEMGVIVENPNSSKPIVIREVWASNLESEFEVIREVIDDYPFISMDTEFPGVVFRPHVVDPTKPYLFRLRPSDHYRFLKFNVDALNLIQVGITLSDADGNLPHLETGNRFIWEFNFRDFDVDRDDYASDSIDLLRRQGIDFRRNTAEGIDSNLFAELVMSSGLVCNDSVSWVTFHSAYDFGYLVKILTRRNLPNGLEEFLKMLRAFFGNNVYDIKHMMQFCDTLYGGLDRLARTLNVDRAVGKCHQAGSDSLLTWHVFQKMRDIYFVKDGPHKHVGVLFGLELTCSAP 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02786 312 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 35 307 - -
Gma13g02786 312 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 35 307 IPR039637 GO:0004535|GO:0030014
Gma13g02786 312 SUPERFAMILY Ribonuclease H-like 41 304 IPR012337 -
Gma13g02786 312 Pfam CAF1 family ribonuclease 45 173 IPR006941 -
Gma13g02786 312 Gene3D - 29 308 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02786 Gma-Chr13 42430099 42431241 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02786 K12581 - gmx:100781759 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02786 13 42430099 42431241 Gma13g02786 13 42430099 42431241 ECH
Gma13g02786 13 42430099 42431241 Gma12g01769 12 38282807 38284031 GST
Gma13g02786 13 42430099 42431241 Gma12g00829 12 7751997 7753223 PCT
Gma13g02786 13 42430099 42431241 Gma11g01469 11 15440783 15442463 PCT
Gma12g00829 12 7751997 7753223 Gma13g02786 13 42430099 42431241 PCT
Gma11g01469 11 15440783 15442463 Gma13g02786 13 42430099 42431241 PCT