Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01469 ATGGGCGTCTTCAGCGAAAACCCGAATCCGGACCCGGTTGTGATCCGCCAGGTTTGGGCTTCAAATCTCGAATCCGAATTCCAACTCATCCGCGAACTCATCGACCACTATCCTTTTATCTCGATGGACACAGAATTCCCCGGTGTTGTTTTCCGACCACACCTGGACCCCACAAAACCCTACAACCACCGCAACAACAATCGCAACCGCCACTCCGACCACTACCGCCTCCTCAAGTCCAACGTCGACGCTCTCAACCTCATCCAGGTCGGCCTCACTCTCACCGACGCCGCCGGCAACCTTCCCGATCTCGCCGGAAACCGCTCCATCTGGGAATTCAACTTCCGTGACTTCGACGTTGCGCGTGACGCCTACGCGCTGGACTCCATCGATCTCCTCCGCCGTCAAGGAATCGATTTCGCGCGTAACGCCACCGACGGCGTAGACTCCACGCGCTTCGCTGAACTCATGATGTCTTCGGGACTCGTCTGCAACGATTCCGTGAGCTGGGTGACGTTTCACAGCGCGTACGATTTCGGTTACTTGGTGAAGATCTTGACGCGCCGTAACTTACCGACGCGGTTGGAAGAATTCTTGAAAACCGTGAAGGTGTTTTTTGGGGACAACGTTTATGATGTCAAGCACATGATGAGGTTCTGTGACACGCTCTACGGCGGATTGGACCGCGTCGCACGGACGCTTAACGTGGAACGCGCCGTAGGGAAGTGCCACCAGGCTGGGTCAGACAGCTTGCTGACGTGGCACGCGTTCCAGAAGATTGTTGACATTTATTTTGTAAAGGATGAGCACCGAAAACACGCCGGTGTATTGTATGGACTAGAGGAGCACAAAAGCAATGTGATTGAAGCCTATAATTGCCAGAGATTCAATTGTGAATTGGTGTAA 906 0.5386 MGVFSENPNPDPVVIRQVWASNLESEFQLIRELIDHYPFISMDTEFPGVVFRPHLDPTKPYNHRNNNRNRHSDHYRLLKSNVDALNLIQVGLTLTDAAGNLPDLAGNRSIWEFNFRDFDVARDAYALDSIDLLRRQGIDFARNATDGVDSTRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTRRNLPTRLEEFLKTVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVERAVGKCHQAGSDSLLTWHAFQKIVDIYFVKDEHRKHAGVLYGLEEHKSNVIEAYNCQRFNCELV 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01469 301 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10 282 IPR039637 GO:0004535|GO:0030014
Gma11g01469 301 SUPERFAMILY Ribonuclease H-like 14 280 IPR012337 -
Gma11g01469 301 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 10 282 - -
Gma11g01469 301 Pfam CAF1 family ribonuclease 18 149 IPR006941 -
Gma11g01469 301 Gene3D - 4 284 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01469 Gma-Chr11 15440783 15442463 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01469 K12581 - gmx:100500357 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01469 11 15440783 15442463 Gma11g01469 11 15440783 15442463 ECH
Gma12g00829 12 7751997 7753223 Gma11g01469 11 15440783 15442463 GST
Gma13g02786 13 42430099 42431241 Gma11g01469 11 15440783 15442463 PCT
Gma12g01769 12 38282807 38284031 Gma11g01469 11 15440783 15442463 PCT
Gma11g01469 11 15440783 15442463 Gma13g02786 13 42430099 42431241 PCT
Gma11g01469 11 15440783 15442463 Gma12g01769 12 38282807 38284031 PCT