Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00829 ATGGGCGTGTTCAGCGAAGATCCGAATCCCAACCCGAACCCGATCGTGATCCGAGAGGTTTGGGCCTCCAATCTCGAATCCGAATTCGAACTCATCCGCGAACTCATCGATCGCTACCCTTTTATCTCAATGGACACAGAATTTCCCGGTGTTATTTTCCGACCACATGTGGACCCCACCAAACCCTTCAACCACCGCAACCGTCCCTCCGACCACTACCGCCTCCTCAAGTCCAACGTTGACGCTCTCAACCTCATCCAGGTCGGCCTCACcctcaccgacgccgccggcaacctccccgacctcgccggaaaccGCTCCATCTGGGAATTCAACTTCCGTGACTTCGACGTGGCGCGTGACGCCTACGCTCCCGACTCCATCGATCTTCTCCGTCGTCAGGGCATCGATTTCGCGCGTAACACCGCCGACGGCGTGGATTCCACGTGCTTCGCGGAGCTGATGATGTCTTCGGGGCTCGTGTGCAACGACGCCGTGAGTTGGGTCACGTTCCACAGCGCGTACGATTTCGGTTACTTGGTGAAGATCTTGACGCGCCGTAACCTACCGACGAGGTTGGAGGAATTCTTGAAAACCGTGAAGGTGTTCTTCGGAGATAACGTTTACGACGTGAAGCACATGATGAGGTTCTGTGACACGCTCTACGGCGGATTGGACCGCGTTGCACGGACGCTTAACGTGGACCGCGCCGTAGGGAAGTGCCACCAGGCCGGGTCAGACAGCTTGCTGACGTGGCACGCCTTCCAGAAGATTGTTGACATTTATTTTGTAAAGGAAGAGCACCGAAAACATGCCGGTGTATTGTTTGGACTATAG 837 0.5233 MGVFSEDPNPNPNPIVIREVWASNLESEFELIRELIDRYPFISMDTEFPGVIFRPHVDPTKPFNHRNRPSDHYRLLKSNVDALNLIQVGLTLTDAAGNLPDLAGNRSIWEFNFRDFDVARDAYAPDSIDLLRRQGIDFARNTADGVDSTCFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRRNLPTRLEEFLKTVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDIYFVKEEHRKHAGVLFGL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00829 278 Pfam CAF1 family ribonuclease 20 146 IPR006941 -
Gma12g00829 278 SUPERFAMILY Ribonuclease H-like 16 277 IPR012337 -
Gma12g00829 278 PANTHER RIBONUCLEASE CAF1, RIBONUCLEASE H-LIKE DOMAIN PROTEIN-RELATED 14 278 - -
Gma12g00829 278 Gene3D - 5 278 IPR036397 GO:0003676
Gma12g00829 278 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 14 278 IPR039637 GO:0004535|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00829 Gma-Chr12 7751997 7753223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00829 K12581 - gmx:100811298 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00829 12 7751997 7753223 Gma12g00829 12 7751997 7753223 ECH
Gma12g00829 12 7751997 7753223 Gma11g01469 11 15440783 15442463 GST
Gma13g02786 13 42430099 42431241 Gma12g00829 12 7751997 7753223 PCT
Gma12g01769 12 38282807 38284031 Gma12g00829 12 7751997 7753223 PCT
Gma12g00829 12 7751997 7753223 Gma13g02786 13 42430099 42431241 PCT
Gma12g00829 12 7751997 7753223 Gma12g01769 12 38282807 38284031 PCT