Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01769 ATGATTTCACCGCAAACCAGACATTCCTTCGGTTCACTCTTGCTCCTTTTCCTCGTGTTGTTGCAGAAGCGATTCCAAATGGGCTTGCTAGAAGAAAACCCTAATCATTCCAAGACCATCCTGATCCGCGAGGTCTGGGCATCCAACCTCGAATCCGAATTCCAGCTGATTCGTCAAGTCATCGATGATTACCCTTTCATTTCCATGGACACCGAATTCCCCGGCGTCGTTTTCCGTCCCCACACTGTAGACCCCACAAAACCCTACCTCCCACCTTCCGTCCACTACCGCTTTCTCAAGTCCAACGTTGATGCACTTAACCTGATCCAGATCGGTCTCACTCTCTCTGATTCCAACGGAAATCTCCCCCACCTCGGAACCGCCAACCGCTTCATCTGGGAATTCAACTTCCGTGACTTCGACGTGGAGCGTGACGCCCACGCGCCTGACTCCATCGATCTCCTCCGCCGCCAGGGAATCGACTTCCGCCGCAACGCGGCGGAGGGCGTCGACTCCTACCTGTTCGCCGAACTCGTGATGTCCTCGGGACTCGTCTGCAACGACTCGGTGAGTTGGGTGACGTTTCACAGCGCGTACGATTTCGGGTACTTGGTTAAGATCCTGACCCGGCGGAGCCTGCCGAGCGGGTTGGAGGAGTTCTTGAACATGTTGAGGGCGTTTTTCGGGAACAACGTTTACGACATAAAGCACATGATGCGGTTCTGCGACACGCTCCATGGCGGTCTGGACCGGCTCGCGCGAACCCTAAACGTGGACCGGGCCGTTGGGAAATGCCACCAGGCCGGGTCTGATAGCTTGCTGACGTGGCACGCGTTTCAGAAAATGAGGGATATTTATTTCGTGACGGATGGGCCCCAGAAACATGCCGGTGTTTTGTTTGGATTGGAGCTCACTTGCTCAACCAGTTGA 930 0.5495 MISPQTRHSFGSLLLLFLVLLQKRFQMGLLEENPNHSKTILIREVWASNLESEFQLIRQVIDDYPFISMDTEFPGVVFRPHTVDPTKPYLPPSVHYRFLKSNVDALNLIQIGLTLSDSNGNLPHLGTANRFIWEFNFRDFDVERDAHAPDSIDLLRRQGIDFRRNAAEGVDSYLFAELVMSSGLVCNDSVSWVTFHSAYDFGYLVKILTRRSLPSGLEEFLNMLRAFFGNNVYDIKHMMRFCDTLHGGLDRLARTLNVDRAVGKCHQAGSDSLLTWHAFQKMRDIYFVTDGPQKHAGVLFGLELTCSTS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01769 309 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 35 304 IPR039637 GO:0004535|GO:0030014
Gma12g01769 309 Gene3D - 30 305 IPR036397 GO:0003676
Gma12g01769 309 Pfam CAF1 family ribonuclease 45 173 IPR006941 -
Gma12g01769 309 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 35 304 - -
Gma12g01769 309 SUPERFAMILY Ribonuclease H-like 42 301 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01769 Gma-Chr12 38282807 38284031 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01769 K12581 - gmx:100817875 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01769 12 38282807 38284031 Gma12g01769 12 38282807 38284031 ECH
Gma13g02786 13 42430099 42431241 Gma12g01769 12 38282807 38284031 GST
Gma12g01769 12 38282807 38284031 Gma12g00829 12 7751997 7753223 PCT
Gma12g01769 12 38282807 38284031 Gma11g01469 11 15440783 15442463 PCT
Gma12g00829 12 7751997 7753223 Gma12g01769 12 38282807 38284031 PCT
Gma11g01469 11 15440783 15442463 Gma12g01769 12 38282807 38284031 PCT