Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02754 ATGGATCGCCACAGCATCCCCGGCGTCTCCAATCTCTGCATCTTCCTCTTCCTTGTTTCTCTTTTCCCACAAGCATTAACGCTGCGGGTCTCTTCTCCGTCGTCACCGACGGGTCAGATTAACTCAAATTCAATCCTCGTGGCTCTTCTGGACTCGCATTACACGGAACTCGCGGAGCTCGTTGAAAAAGCCATGCTGTTACAGAAACTAGAAGACACTGTCGCCACTCACAACATAACAATCTTCGCTCCGACCAACGAAGCCTTATACCGCAACCTCGACCCCGATTTCAAGCGCTTCCTCCTCCAACCCGCCAATCTTCACTCCCTCCAGACGCTCCTCCTCTCTCACATCACCCCCGCCCTAATCGGATCCCAAACCCTAACACGCCACGTCACCACTCTCTCCGACCACAACCTCAAACTCTCCGAAAACCTCACCACCGTCGACCAAGCCAGAGTCACCCACCCGAATGTTGTGACCCGACCCGACGGCGTCATCCACGGCATCGACCGCCTCCTCCTCCCCCGTTCCGTCGAGGACGACTTCAACCGCCGCCGCAGCCTCCGCTCCATCTCCGCCGTCAAACCCGAACCTGCCCCGGAGGTCGACCCGAGAACCCACCGTCTCAAAAAACCCCCCCCACCGGCGAAACCTGGTTCTCTTCCAGAACTTCCGATCTACGACGCGATGGCTCCGGGACCCTCCCTGGCCCCGGCGCCGGCGCCGGGGCCAGGCGGCCCGCACCACCACTTCAACGGCGAAAGACAAGTGAAGGACTTCATCCACACGCTCCTCCACTACGGCGGGTACAACGAGATGGCAGACATTCTCGTAAACCTAACGTCGTTGGACGTTGAAATGGGTCGTTTAGTCTCAGAGGGTTACGTGCTCACCGTTTTGGCACCAAACGACGAAGCGATGGCGAAGTTGACGACGGAGCAGTTAAGCGAACCGGGGGCACCGGAGCAGATAATGTACTATCACATAATCCCGGAGTACCAGACCGAAGAGAGTATGTACAATGCCGTTAGAAGGTTCGGGAAGGTTCGTTACGATACCCTACGGTTGCCGCATAAGGTGGTTGCTCAAGAAGCTGATGGGTCCGTTAAATTCGGGCACGGGGACGGGTCGGCTTATTTGTTCGACCCGGATATTTACACAGACGGGCGGATCTCGGTTCAGGGGATTGATGGGGTTTTGTTTCCGGCGGCGGAGGAGGATGCGGAGCGGGTTAGACCCGTTACCCAAACGGGTCAGAACGCTACGAAGCTTGTTGTCAAGCACAGGAGAGGAAAATTGCTGGAAACAGCATGCTGGATGCTTGGAACCTTTGGACAGCATTCTAGATTCGCCTCTTGTCAATGA 1368 0.5658 MDRHSIPGVSNLCIFLFLVSLFPQALTLRVSSPSSPTGQINSNSILVALLDSHYTELAELVEKAMLLQKLEDTVATHNITIFAPTNEALYRNLDPDFKRFLLQPANLHSLQTLLLSHITPALIGSQTLTRHVTTLSDHNLKLSENLTTVDQARVTHPNVVTRPDGVIHGIDRLLLPRSVEDDFNRRRSLRSISAVKPEPAPEVDPRTHRLKKPPPPAKPGSLPELPIYDAMAPGPSLAPAPAPGPGGPHHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLDVEMGRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPGAPEQIMYYHIIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPAAEEDAERVRPVTQTGQNATKLVVKHRRGKLLETACWMLGTFGQHSRFASCQ 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02754 455 Gene3D FAS1 domain 27 177 IPR036378 -
Gma13g02754 455 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 4 455 - -
Gma13g02754 455 SUPERFAMILY FAS1 domain 42 177 IPR036378 -
Gma13g02754 455 Pfam Fasciclin domain 297 403 IPR000782 -
Gma13g02754 455 Pfam Fasciclin domain 53 176 IPR000782 -
Gma13g02754 455 ProSiteProfiles FAS1/BIgH3 domain profile. 258 386 IPR000782 -
Gma13g02754 455 Gene3D FAS1 domain 282 404 IPR036378 -
Gma13g02754 455 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 4 455 IPR044654 -
Gma13g02754 455 SUPERFAMILY FAS1 domain 237 403 IPR036378 -
Gma13g02754 455 MobiDBLite consensus disorder prediction 190 254 - -
Gma13g02754 455 ProSiteProfiles FAS1/BIgH3 domain profile. 41 174 IPR000782 -
Gma13g02754 455 SMART fasc_3 80 177 IPR000782 -
Gma13g02754 455 SMART fasc_3 299 404 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02754 Gma-Chr13 42126070 42128841 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02754 - - gmx:100815434 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02754 13 42126070 42128841 Gma12g01803 12 38646616 38649648 GST
Gma13g02754 13 42126070 42128841 Gma12g00856 12 8253570 8257686 PCT
Gma13g02754 13 42126070 42128841 Gma06g02739 06 51177072 51182229 PCT
Gma12g00856 12 8253570 8257686 Gma13g02754 13 42126070 42128841 PCT
Gma06g02739 06 51177072 51182229 Gma13g02754 13 42126070 42128841 PCT