Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02739 ATGGATTTTCGCATCTATGGCGTCACGATCCTTCTCTTCCTCTTCCCAACCCTCACATTCTCAATCTCACAGGGTCAGATAAACTCAAACTCAATCCTTGTCGCTCTGTTGGACTCCCATTACACCGAACTCGCTGAGCTTGTGGAAAAAGCCATGCTTTTGCAGACTCTGGAGAACACTGTCATGAACAACAGCAACAACATCACAATCTTCGCTCCCAGAAACGAAGCCCTCGAACGCGATCTCGACCCCGATTTCAAGCGTTTCCTCCTCGAACCCCGCAATCTCCATTCCCTCCAAACCCTCCTGTTGTCCCACATCGTCCCCAAAAGAATCACCAAACCCGAATTCAAAACCGGGTCGACCCGACACAGAACTTTAGCGTCTCACCACCACCTCACTCTCCAAGCCCTGAATTTGACTCACTGGAATGTTGAGTCTTCCCGGGTTATTAACCCGAATTCGGTAACCCGACCCGACGGAGTGATCCACGGCATCGACACTCTCCTCATCCCTCGCTCAGTCCAAGACGAATTCAACCGTCGCCGGAATCTGATCTCCATCGCCGCGGTAAAACCCGAACCATCCCCGGAGGTCGACCCGCGAACCCACCGGTTAAAGAAACCGGCGCCGGCATCGCCGGCGGGGGCCCCGCCGGCGCTCCCGATCTACGACGCGATGGCGCCGGGGCCATCGCTTGCACCGGCGCCAGCGCCGGGTCCGGGTGGGTCTCACAAGCACTTCAATGGGGAAAAGCAAGTAAAAGATTTCATCGAGACGTTACTCCACTACGGCGGCTACAACGAGATGGCGGATATTCTGGTAAACCTAACGTCCCTGGCGACGGAGATGGGAAGGTTGGTTTCGGAGGGTTACGTTTTGACGGTGTTAGCTCCTAACGACGAGGCCATGGCGAAGTTAGCGACGGAGCAATTAAGTGAACCGGGTTCGCCCGAACAGATTATGTACTATCACTTGATACCCGAGTATCAGACCGAGGAGAGCATGTACAATGCCGTCAGAAGGTTCGGGAAGGTCCGTTACGACACGTTACGGTTGCCGCACAAGGTCACGGCGCAGGAGGCTGACGGCTCCGTTAAGTTCGGCCACGGGGACACGTCTGCTTACTTGTTCGACCCCGATATTTACACGGATGGACGGATCTCCGTTCAGGGAATTGACGGCGTTCTGTTTCCGCCTCAGGAGGAAGAAGCCGCCGGGCCCGTTACCCGAGCCCAGCCCGCTAAGGTCGTCGTCAAGCAAAGAAGAGGAAAATTGTTGGAAACAGCATGTTGGATGCTTGGAAGCTTTGGACAGAACTCTAGATTCATCTCTTGTCAATGA 1344 0.5484 MDFRIYGVTILLFLFPTLTFSISQGQINSNSILVALLDSHYTELAELVEKAMLLQTLENTVMNNSNNITIFAPRNEALERDLDPDFKRFLLEPRNLHSLQTLLLSHIVPKRITKPEFKTGSTRHRTLASHHHLTLQALNLTHWNVESSRVINPNSVTRPDGVIHGIDTLLIPRSVQDEFNRRRNLISIAAVKPEPSPEVDPRTHRLKKPAPASPAGAPPALPIYDAMAPGPSLAPAPAPGPGGSHKHFNGEKQVKDFIETLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLATEQLSEPGSPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVTAQEADGSVKFGHGDTSAYLFDPDIYTDGRISVQGIDGVLFPPQEEEAAGPVTRAQPAKVVVKQRRGKLLETACWMLGSFGQNSRFISCQ 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02739 447 ProSiteProfiles FAS1/BIgH3 domain profile. 254 397 IPR000782 -
Gma06g02739 447 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 1 447 IPR044654 -
Gma06g02739 447 SUPERFAMILY FAS1 domain 233 400 IPR036378 -
Gma06g02739 447 Pfam Fasciclin domain 40 172 IPR000782 -
Gma06g02739 447 Pfam Fasciclin domain 279 399 IPR000782 -
Gma06g02739 447 SUPERFAMILY FAS1 domain 31 173 IPR036378 -
Gma06g02739 447 Gene3D FAS1 domain 244 400 IPR036378 -
Gma06g02739 447 SMART fasc_3 295 400 IPR000782 -
Gma06g02739 447 SMART fasc_3 69 173 IPR000782 -
Gma06g02739 447 MobiDBLite consensus disorder prediction 193 244 - -
Gma06g02739 447 Gene3D FAS1 domain 32 173 IPR036378 -
Gma06g02739 447 ProSiteProfiles FAS1/BIgH3 domain profile. 28 170 IPR000782 -
Gma06g02739 447 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 1 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02739 Gma-Chr6 51177072 51182229 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02739 - - gmx:100802279 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00856 12 8253570 8257686 Gma06g02739 06 51177072 51182229 GST
Gma13g02754 13 42126070 42128841 Gma06g02739 06 51177072 51182229 PCT
Gma12g01803 12 38646616 38649648 Gma06g02739 06 51177072 51182229 PCT
Gma06g02739 06 51177072 51182229 Gma13g02754 13 42126070 42128841 PCT
Gma06g02739 06 51177072 51182229 Gma12g01803 12 38646616 38649648 PCT