Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02689 ATGTTTGGTTCCTCACTCCGAAACTCAATAGCTATTAATTCTTTAGCCATGCCTGAAGCTCCAAAGCACTTATGCCACGATCCAAAGGATAACCTTGATGATGATGATGATGGTAATAGTAACAACAATAAGAGAGCACTCGAATACATTGAGGAGGTCACCACCAACGCTGATGAAATTCAAGAAAAGGTGCTTGCCCAGATCCTTTCTCGAAGTGCAAACGCTGAATACCTCCAACGCCATGGCCTAGAAGGACGCACTGACAGAAACACCTTCAAGAATATCATGCCCGTGGTCACTTACGAGGATTTAAAGCCAGATATTGATCGTATAGCCAATGGTGATACCTCCCCAATTTTATGCTCCAAACCCATATCAGAGTTCCtcactagCTCTGGGACTTCTGGTGGGGAGAGAAAATTGATGCCAACCATAGAAGAGGAGCTAGAGAGGAGATCAATGCTTTATAGCCTCTTGATGCCAGTGATGGATCAGTTTGTGCCCGATTTGGACAAAGGCAAAGGCATGTACTTTTTGTTCACAAAATCAGAAGCCAAAACCCCTGGTGGACTCCTTGCTCGTCCAGTTTTGACAAGCTATTACAAAAGCTCACATTTCAAGCACCGCAAACACGATCCCTACACAAACTACACAAGCCCCAATGAAACCATTCTCTGCCATGACTCTTACCAAAGCATGTACTCTCAGTTACTTTGTGGCCTTTACCAAAACGAGGAAGTTCTTCGTGTTGGCGCAGTCTTCGCCTCAGGTTTCATTCGTGCCCTTAAGTTCCTCGAAAAACACTTTGTTTGTTTGTGCAATGACATAAGAACTGGTACCTTAGACGCCAAAATCACTGACCCTTCTGTGAGAGAGGCTGTTATGAAAGTACTCAAACCAAATCCCACGCTTGCGGATTTCGTAGAAACTGAATGCATGAAGGGGTCATGGAAGGGAATTATTACTAGGATATGGCCCAACACCAAGTATGTTGATGTTATTGTCACGGGAACCATGTCTCAGTACATTCCCATATTGGATTATTATAGCAATGGTCTCCCTCTTGTGTGCACCATGTATGCTTCTTCTGAGTGCTATTTTGGCCTCAATTTGAACCCTTCGTGTGATCCAAGTGAGGTAGCTTACACCCTTATTCCTACCATGGCTTACTTTGAGTTCTTGCCCCTCGATGAGATCAACGGACATACTAATTCAATTTCTCAACTGGAGCAAGAGCATTTGGTGGATCTTGCAGATGTGAAGTTGGGTCAAGAATATGAGCTTGTGGTCACCACTTATGCAGGACTTTATAGATACCGGGTTGGTGACATTCTCCGTGTAGCCGGATTCAAGAACAAGGCTCCTCAATTCAACTTCGTGTGCCGAAAGAACGTGGTTCTGAGCATTGACTCTGACAAAACCGACGAAGTTGAGCTACATAATGCAGTGAAGAGTGGAGCTGAGCATCTTGCTGAATTCAATGCATCTCTAACAGAATACACAAGCTGCGTGGACACATCAACCATCCCTGGCCACTACGTTCTGTACTGGGAAATTAGCACAAATGACCATACCCCAACAATTCCTTCTTCCGTTTTTGGGCATTGTTGCCTTTCGATTGAGGAGTCTCTAAACAGCGTGTATCGCCAAGGAAGGGTGTCAGAGTCTATTGGACCATTGGAAATTAAGGTGGTTGAGAATGGCACATTTGACAAGCTCATGGACTTTGCTCTCAGCCAGGGTGCGTCCATTAACCAATACAAGACTCCTCGTTGCGTCACATATGCGCCCATTCTGGACCTTCTAAACTCTAAAGTGTTGTCCAGTTACATTAGCCCAAAATCCCCAAATTGGGTTCCTGGTCACAAGGACTGGTGCACTCTTCATTGA 1890 0.4466 MFGSSLRNSIAINSLAMPEAPKHLCHDPKDNLDDDDDGNSNNNKRALEYIEEVTTNADEIQEKVLAQILSRSANAEYLQRHGLEGRTDRNTFKNIMPVVTYEDLKPDIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELERRSMLYSLLMPVMDQFVPDLDKGKGMYFLFTKSEAKTPGGLLARPVLTSYYKSSHFKHRKHDPYTNYTSPNETILCHDSYQSMYSQLLCGLYQNEEVLRVGAVFASGFIRALKFLEKHFVCLCNDIRTGTLDAKITDPSVREAVMKVLKPNPTLADFVETECMKGSWKGIITRIWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGLNLNPSCDPSEVAYTLIPTMAYFEFLPLDEINGHTNSISQLEQEHLVDLADVKLGQEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELHNAVKSGAEHLAEFNASLTEYTSCVDTSTIPGHYVLYWEISTNDHTPTIPSSVFGHCCLSIEESLNSVYRQGRVSESIGPLEIKVVENGTFDKLMDFALSQGASINQYKTPRCVTYAPILDLLNSKVLSSYISPKSPNWVPGHKDWCTLH 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02689 629 Pfam GH3 auxin-responsive promoter 50 594 IPR004993 -
Gma13g02689 629 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 35 625 IPR004993 -
Gma13g02689 629 Coils Coil 43 63 - -
Gma13g02689 629 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 35 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02689 Gma-Chr13 41604143 41607815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02689 40 612 EF-hand Containing Proteins AT1G23160 49.485 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02689 K14487 - gmx:100818961 1252.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02689 13 41604143 41607815 Gma13g02689 13 41604143 41607815 ECH
Gma13g02689 13 41604143 41607815 Gma12g01866 12 39295095 39299203 GST
Gma13g02689 13 41604143 41607815 Gma12g00924 12 9402191 9405874 PCT
Gma13g02689 13 41604143 41607815 Gma06g02682 06 50482507 50486314 PCT
Gma12g00924 12 9402191 9405874 Gma13g02689 13 41604143 41607815 PCT
Gma06g02682 06 50482507 50486314 Gma13g02689 13 41604143 41607815 PCT