Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00924 ATGCCTGAGGCTCATAGCCACTACCTTTGCAACAAGCCAAATGGCAAACATGATGGTGCTACTAATACTAGTAGCATCATCGAGCACAACAACAAGAAAGCTCTGAAATACATTGAGGATGTTACTAGCAACGCTGATGAAATTCAGAAAAGGGTCCTTGCTGAGATCCTTTCTTCTAGTGCACATGCTGAGTACCTTCAACGCCATGGCTTGGATGGACGCACAGACAGAGAAACTTTCAAGAAGATCATGCCTGTGGTGACATACGAGGATTTAAAGCCAGATATTGATCGCATTGCTAATGGTGATACCTCCCCAATTTTATGTTCCAAACCTATTTCTGAGTTCCTCACTAGCTCTGGAACATCTGGTGGGGAGAGAAAACTGATGCCAACCATAGAAGAGGAGCTAGAGCGAAGATCATTACTCTACAGCCTCCTGATGCCAGTGATGGAGCAATTCGTACCTGGCCTAGACAAAGGCAAAGGAATGTACTTTCTGTTCATAAAATCAGAAGCCAAAACCCCTGGTGGACTCTTAGCTCGTCCAGTTTTAACAAGCTACTACAGGAGCTCACACTTCAAGAACAAAACACATTGTTTTGACCCTTACACAAACTACACTAGCCCCATTGAGACCATTCTCTGCCTAGACTCTTACCAAAGCATGTACTCTCAAATGCTCTGTGGACTTTCACAAAACGAGCATGTTCTCCGTGTTGGTGCTGTTTTCGCCTCAGGTTTCATCCGTGCCCTTAAGTTCTTGGAAAAGCATTGGGTGTGTTTGTGCCGTGACATTAGAAATGGCACCATTGGCCCTGAAATCACTGACTCATCCGTTAGAGAAGCCATCATGAGGGTACTCAAACCAAACCCAAAACTTGCGGATTTTATAGAGGGTGAGTGCAAGAAGGGGTTGTGGAAAGGGATAATTACTAGGTTGTGGCCTAATACCAAGTACGTTGATGTTATTGTGACTGGAACCATGGCTCAGTATATTCCTATGTTGGATTACTATAGCAATGGTCTCCCTCTTGTTTGCACCATGTATGCTTCTTCTGAGTGTTATTTTGGACTCAACTTGAACCCTTTGTGTGATCCTAGTGAGGTGTCTTATACCCTTGTTCCCACCATGGCTTACTTTGAGTTCTTGCCCCTTAATAAGACGAAGGAACATGCGAATTCAATTTCTTACACCGAGCAGGAACTTTTGGTTGATCTTGTGGATGTGGAGCTGGGGCAAGAATATGAGCTTGTGGTCACCACTTATGCAGGACTTTACAGGTACCGGGTCGGCGACATCCTCCGTGTAGCAGGATTCAAGAACAATGCTCCTCAATTCAATTTCGTGTGCCGAAAGAACGTGGTTCTTAGCATTGATTCCGACAAGACCGATGAGGTTGAGCTACAAAACGCTGTGAAAAATGGAGCCAACCACCTTACACTATTCGGTGCATCACTCACAGAATACACAAGCTTTGCTGATACGTCCACTATCCCTGGCCACTATGTACTATACTGGGAAATCAGCATGAACAAGAACAACAACATTGATCAAAATCAAAACCCAATTCCAAGTTCTGTTTTTGAGGAGTGTTGCTTTGCAGTTGAAGGGTCTCTCAACAGCGTGTATCGACAAGGAAGAGTATCAGAGTCCATTGGGCCATTGGAAATCAAGATTGTGGAGAATGGAACTTTTGATAAGCTTATGGACTTTGCTCTTAGCCAGGGTGCGTCTATAAATCAGTACAAGACACCTCGTTGTGTGAAGTATGCTCCCATTGTTGAGCTTCTTGACTCGAAAACTGTTTCCAATTACTTCAGTCCAAAATGTCCACTGTGGGTTCCTGGTCACAAGAAGTGGTGCATGTACCCTCTTGACAACAAATAA 1890 0.4418 MPEAHSHYLCNKPNGKHDGATNTSSIIEHNNKKALKYIEDVTSNADEIQKRVLAEILSSSAHAEYLQRHGLDGRTDRETFKKIMPVVTYEDLKPDIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMEQFVPGLDKGKGMYFLFIKSEAKTPGGLLARPVLTSYYRSSHFKNKTHCFDPYTNYTSPIETILCLDSYQSMYSQMLCGLSQNEHVLRVGAVFASGFIRALKFLEKHWVCLCRDIRNGTIGPEITDSSVREAIMRVLKPNPKLADFIEGECKKGLWKGIITRLWPNTKYVDVIVTGTMAQYIPMLDYYSNGLPLVCTMYASSECYFGLNLNPLCDPSEVSYTLVPTMAYFEFLPLNKTKEHANSISYTEQELLVDLVDVELGQEYELVVTTYAGLYRYRVGDILRVAGFKNNAPQFNFVCRKNVVLSIDSDKTDEVELQNAVKNGANHLTLFGASLTEYTSFADTSTIPGHYVLYWEISMNKNNNIDQNQNPIPSSVFEECCFAVEGSLNSVYRQGRVSESIGPLEIKIVENGTFDKLMDFALSQGASINQYKTPRCVKYAPIVELLDSKTVSNYFSPKCPLWVPGHKKWCMYPLDNK 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00924 629 Pfam GH3 auxin-responsive promoter 38 590 IPR004993 -
Gma12g00924 629 MobiDBLite consensus disorder prediction 1 23 - -
Gma12g00924 629 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 23 621 - -
Gma12g00924 629 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 23 621 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00924 Gma-Chr12 9402191 9405874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00924 23 608 EF-hand Containing Proteins AT1G23160 49.406 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00924 K14487 - gmx:100819676 1259.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00924 12 9402191 9405874 Gma12g00924 12 9402191 9405874 ECH
Gma12g00924 12 9402191 9405874 Gma06g02682 06 50482507 50486314 GST
Gma13g02689 13 41604143 41607815 Gma12g00924 12 9402191 9405874 PCT
Gma12g01866 12 39295095 39299203 Gma12g00924 12 9402191 9405874 PCT
Gma12g00924 12 9402191 9405874 Gma13g02689 13 41604143 41607815 PCT
Gma12g00924 12 9402191 9405874 Gma12g01866 12 39295095 39299203 PCT