Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02682 ATGCCTGAGGCTCCTAGCCAGTACCTTTGCAACAAGCCAAATGGAAAACTTGATGATGGTGGTGCTACTAATACTAGCATCATCATCGAGCACAACAATAAGAAAGCACTCAAATACATTGAGGATGTTACTAGCAACGCTGATGAAATTCAGAAAAGGGTCCTTGCTGAGATCCTTTCTTGTAGTGCACACGTTGAGTACCTTCAACGCCATGGCTTGGAGGGGCGCACGGATAGAGAAACATTCAAGAAGATCATGCCTGTGGTGACATACGAGGATTTAAAGCCAGATATTGATCGTATTGCTAATGGTGATGCCTCCCCAATTTTATGTTCCAAACCTATTTCTGAGTTCCTCACTAGCTCTGGAACATCTGGAGGGGAGAGAAAACTGATGCCAACCATAGAAGACGAGCTAGAGCGAAGATCATTGCTCTACAGCCTCTTGATGCCAGTGATGGACCAATTCGTACCAGGTTTAGACAAAGGCAAAGGAATGTACTTTTTGTTCATAAAATCAGAATCCAAAACCCCTGGTGGACTCTTAGCTCGTCCAGTTTTAACAAGTTACTACAAAAGCTCACACTTCAAGAACAAAACACACGGTTTAAATTTTGACCCTTACACAAACTACACTAGCCCCATTGAGACCATTCTCTGTCAAGACTCTTACCAAAGCATGTACTCTCAAATGCTTTGTGGACTTTCTCAAAACGAGCATGTTCTCCGTGTTGGTTCTGTTTTTGCCTCAGGTTTCATCCGTGCCCTCAAGTTCTTAGAAAAACACTGGGAAAGTTTGTGTCATGACATAAGAAATGGCACCATTGACCATGAAATCACTGATTCAACCGTGAGAGAGGCCATCATGAAAATACTCAAACCAAACCCAAAACTTGCGGATTTTATAGAGGGTGAGTGCAAGAAGGGTTTGTGGAAAGGGATCATTACTAGGTTGTGGCCTAATACCAAGTATGTTGATGTTATTGTGACTGGAACCATGGCTCAGTATATTCCTATGTTGGATTACTATAGCAATGGTCTTCCTCTCGTTTGCACCATGTATGCTTCTTCTGAGTGTTATTTTGGACTCAACTTGAACCCTTTGTGTGATCCTAGTGAGGTGTCTTACACCCTTGTTCCCACCATGGCTTACTTTGAGTTCTTGCCACTTAATAAGATGAAGGGACATGCCAATTCAATTTCTCACACCGAGCAGGAACTTTTGGTTGATCTTGTGGATGTGGAGCTGGATCAAGAATATGAGCTTGTGGTCACCACTTATGCAGCTTCTAACAATTATGTCATCATGCACAATCCACACACAGGACTCTACAGGTACCGGGTTGGCGACATCCTCCGTGTGGCAGGATTCAAGAACAACGCTCCTCAATTCAACTTCGTGTGCCGAAAGAACGTTGTTCTGAGCATTGATTCCGACAAGACCGACGAGGTTGAGCTACAAAACGCAGTGAAGAATGGAGCCAAGCACCTTGCAACATTGGGTGCATCACTCACAGAATACACAAGCTGCGCTGACACGTCCACTATACCAGGCCACTACGTACTATACTGGGAAATTAACATGAACAATAATGATCAAACCCCAATTCCAAGTTCTGTTTTTGAGGAGTGTTGCTTTGCAGTTGAAGGGTCTCTCAACAGCGTGTATAGACAAGGAAGAGTTTCCGAGTCCATTGGGCCATTGGAAATCAAGATTGTGGAGAACGGAACTTTTGATAAGCTTATGGACTTTGCCCTTAGCCAGGGTGCGTCTATAAATCAGTATAAGACACCTCGTTGTGTGAAGTATGCTCCCATTGTTGAGCTTCTTGACTCCAAGACTGTTTCCAATTACTTCAGTCCAAAATGTCCACAGTGGGTTCCTGGTCACAAGAAGTGGTGCATGTACCCTTGA 1914 0.4378 MPEAPSQYLCNKPNGKLDDGGATNTSIIIEHNNKKALKYIEDVTSNADEIQKRVLAEILSCSAHVEYLQRHGLEGRTDRETFKKIMPVVTYEDLKPDIDRIANGDASPILCSKPISEFLTSSGTSGGERKLMPTIEDELERRSLLYSLLMPVMDQFVPGLDKGKGMYFLFIKSESKTPGGLLARPVLTSYYKSSHFKNKTHGLNFDPYTNYTSPIETILCQDSYQSMYSQMLCGLSQNEHVLRVGSVFASGFIRALKFLEKHWESLCHDIRNGTIDHEITDSTVREAIMKILKPNPKLADFIEGECKKGLWKGIITRLWPNTKYVDVIVTGTMAQYIPMLDYYSNGLPLVCTMYASSECYFGLNLNPLCDPSEVSYTLVPTMAYFEFLPLNKMKGHANSISHTEQELLVDLVDVELDQEYELVVTTYAASNNYVIMHNPHTGLYRYRVGDILRVAGFKNNAPQFNFVCRKNVVLSIDSDKTDEVELQNAVKNGAKHLATLGASLTEYTSCADTSTIPGHYVLYWEINMNNNDQTPIPSSVFEECCFAVEGSLNSVYRQGRVSESIGPLEIKIVENGTFDKLMDFALSQGASINQYKTPRCVKYAPIVELLDSKTVSNYFSPKCPQWVPGHKKWCMYP 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02682 637 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 25 633 - -
Gma06g02682 637 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 25 633 IPR004993 -
Gma06g02682 637 Pfam GH3 auxin-responsive promoter 40 602 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02682 Gma-Chr6 50482507 50486314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02682 25 620 EF-hand Containing Proteins AT1G23160 49.007 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02682 K14487 - gmx:100783196 1246.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02682 06 50482507 50486314 Gma06g02682 06 50482507 50486314 ECH
Gma12g00924 12 9402191 9405874 Gma06g02682 06 50482507 50486314 GST
Gma13g02689 13 41604143 41607815 Gma06g02682 06 50482507 50486314 PCT
Gma12g01866 12 39295095 39299203 Gma06g02682 06 50482507 50486314 PCT
Gma06g02682 06 50482507 50486314 Gma13g02689 13 41604143 41607815 PCT
Gma06g02682 06 50482507 50486314 Gma12g01866 12 39295095 39299203 PCT