Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01866 ATGTTTGGTTCCACACTCCGAAACTCAATAGCTATTAATTCTCTAGCCATGCCTAAAGCTACAAAGCACTTATGCCACGATCCAAAGGATAATCTtgatgatgatgatgatggtagtaacactagtaacaacaataaGAGCGCACTCGAATACATTGAAGAGGTCACAAGCAACGCTGATGTAATTCAAGAAAAGGTTCTTGCCCAGATCCTTTCTCGTAGTGCACACGCTGAATACCTCCAACGCCATGGCCTAGATGGGCGCACTGACAGAAACACTTTCAAGAAGATCATGCCCGTGGTCACTTACGAGGATTTGAAGCCATATATTGATCGTATAGCCAACGGTGATACCTCTCCAATTTTATGTTCCAAACCCATATCAGAGTTCCTCACCAGCTCTGGGACTTCTGGTGGGGAGAGAAAATTGATGCCAACCATAGAAGAGGAGCTAGAGAGGAGATCAATGCTTTATAGCCTCTTGATGCCGGTGATGGATCAGTTTGTGCCCGCTTTGGACAAAGGCAAAGGCATGTACTTTTTGTTCACAAAATCAGAAGCCAAGACCCCAGGTGGACTCCTTGCTCGTCCAGTTTTGACCAGCTATTACAAAAGCTCCCATTTCAAGCACCGCAAACACGATCCCTACACAAACTACACAAGCCCCAATGAAACCATTCTCTGCCCTGACTCTTACCAAAGCATGTACTCTCAGTTGCTTTGCGGCCTTTGCCAAAACGAGGAAGTTCTTCGAGTTGGGGCAGTCTTCGCATCAGGTTTCATTCGTGCCCTTAAGTTCCTCGAAAAGCACTTCGTGTCTTTGTGCAATGACATAAGAAAGGGTACCTTAGACGCCAAAATCAACGACCCTTTAGTGAGAGAGGCCGTTATGAAAGTACTTAAACCAAATCCCACGCTTGCGGATTTCGTAGAAGCTGAGTGCATGAAAGGGTCGTGGAAGGGAATTGTTACGAGGATATGGCCTAACACTAAGTATGTTGATGTTATTGTCACGGGAACTATGTCTCAGTACATTCCCATTTTGGATTATTATAGCAATGGTCTCCCTCTTGTGTGCACCATGTATGCTTCTTCTGAGTGCTATTTTGGTCTCAATTTGAACCCCTTGTGTGACCCAAGTGAGGTAGCTTACACCCTCATTCCCACCATGGCATACTTTGAGTTCTTGCCCCTCGATGAGATCAACGGACATACTAATTCAGTTTCTCACCTAGTGCAAGAACAATTGTTGGATCTTGCAGATGTGAAGCTGGGTCAAGAGTATGAGCTTGTGGTCACCACTTATGCAGGACTATATAGGTACCAGGTTGGTGACATTCTCCGTGTAGCCGGATTCAAGAACAAGGCTCCACAATTCAACTTCGTGTGTCGAAAAAACGTTGTTCTGAGCATTGACTCCGACAAAACCGACGAAGTTGAGCTACAAAATGCTGTGAAGAGTGGAGCCGACCATCTTGCTCAATTTGGTGCATCTCTAACAGAATACACAAGCTGTGTGGACACATCAACCATCCCTGGCCACTACGTTCTTTACTGGGAAATTAGCACCAATGGCCATACCCCAACAATTCCTTCTTCCGTTTTTGGTCATTGTTGCCTTGCAATTGAGGAATCACTAAACAGCGTGTATCGCCAAGGCAGAGTATCAGAGTCTATTGGACCCTTGGAAATTAAGATAGTTGAGAATGGCACATTTGACAAGCTCATGGACTTTGCTCTTAGCCAGGGTGCGTCCATTAACCAATACAAGACTCCTCGATGTGTGACATATGCGCCCATTCTGGACCTTCTAAACTCCAACGTTGTGTCCAGTTACTTTAGCCCAAAATGCCCTAATTGGGTTCCTGGTCACAAGGACTGGTGCTCTCTTCATTGA 1896 0.4457 MFGSTLRNSIAINSLAMPKATKHLCHDPKDNLDDDDDGSNTSNNNKSALEYIEEVTSNADVIQEKVLAQILSRSAHAEYLQRHGLDGRTDRNTFKKIMPVVTYEDLKPYIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELERRSMLYSLLMPVMDQFVPALDKGKGMYFLFTKSEAKTPGGLLARPVLTSYYKSSHFKHRKHDPYTNYTSPNETILCPDSYQSMYSQLLCGLCQNEEVLRVGAVFASGFIRALKFLEKHFVSLCNDIRKGTLDAKINDPLVREAVMKVLKPNPTLADFVEAECMKGSWKGIVTRIWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGLNLNPLCDPSEVAYTLIPTMAYFEFLPLDEINGHTNSVSHLVQEQLLDLADVKLGQEYELVVTTYAGLYRYQVGDILRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAVKSGADHLAQFGASLTEYTSCVDTSTIPGHYVLYWEISTNGHTPTIPSSVFGHCCLAIEESLNSVYRQGRVSESIGPLEIKIVENGTFDKLMDFALSQGASINQYKTPRCVTYAPILDLLNSNVVSSYFSPKCPNWVPGHKDWCSLH 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01866 631 Pfam GH3 auxin-responsive promoter 52 596 IPR004993 -
Gma12g01866 631 MobiDBLite consensus disorder prediction 24 40 - -
Gma12g01866 631 MobiDBLite consensus disorder prediction 24 45 - -
Gma12g01866 631 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 37 627 - -
Gma12g01866 631 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 37 627 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01866 Gma-Chr12 39295095 39299203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01866 39 614 EF-hand Containing Proteins AT1G23160 49.573 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01866 K14487 - gmx:100806653 1254.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01866 12 39295095 39299203 Gma12g01866 12 39295095 39299203 ECH
Gma13g02689 13 41604143 41607815 Gma12g01866 12 39295095 39299203 GST
Gma12g01866 12 39295095 39299203 Gma12g00924 12 9402191 9405874 PCT
Gma12g01866 12 39295095 39299203 Gma06g02682 06 50482507 50486314 PCT
Gma12g00924 12 9402191 9405874 Gma12g01866 12 39295095 39299203 PCT
Gma06g02682 06 50482507 50486314 Gma12g01866 12 39295095 39299203 PCT