Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02536 ATGATTGATGGTGAATTCGAGGAATCATTGATCATTATTGTGTTGTGGATAAGTGCTATTTTGGTGTGTTTGGTGATGGGGATGAGGAATGATGCACAGAAGCAACAGCTTCTTCATCAGGGTAATGGTGGTGGCAGAACCAATGGTTTCATTCCAAGTTCTTTCCGTGCTCTCTCTAGCTACCTCAGAGTTGTTTCCTCTGGTGCTTCTACTGTTGCACGTTCTGCTGCATCGGTTGCATCATCGATTGTGGAGAGGGATGATGACCCTGACCATGATCAGGTTATCTGGGCTGGGTTTGACAAGTTAGAGGGTGAGGGTGAAGTTATTCAGCAAGTACTTCTTCTAGGCTATCGATCTGGATTCCAGGTTTGGCATGTCGATGAATCAAATAATGTCCGAGACCTGATTTCCCGACATGATGGTCCTGTTTCTTTTATGCAAATGGTCCCTAATCCAATTGCATCAAAGAGATCACAAGACAAGTATGCAAACAGCCGCCATCTGTTGGTAGTTTGTACTGATGGGTTCTTTGCTGGAGGTAACAATGTTCAGGGTGGGTCAACCATCCCTTACAATGGGAGCACTTCAAACTCCCATGACCAAATAAATGGAAACTATCTGCCAACTACCGTTCGGTTTTATTCTATGAAATCCCAATCATATGTTCATGTACTGAAGTTTAGATCAGTTATTTATTCTGTGAGGTGCAGTTCTCGAGTCGTGGCAGTTTCTCAATCCACTCAGATACACTGTTTTGATGCTACAACATTAGAAAGGGAATATACTTTACTTACCAATCCTATAGTAATGAGTTGCCCTGGTTCTGGAGGCATAGGATATGGACCACTTGCGGTGGGACCAAGATGGCTTGCATATAGTGGAAGTCCAATTGCAATCTCCAACTCAGGACATGTGTGTCCACAACAGTTGACACCTTCCGCAAGGTTTCCTGGTTTTTCTTCTAATGGGAGATTGATTGCACATTATGCGAAAGAGTCCAGCAAGCATCTTGCTTCTGGGATTGTGACCCTTGGAGACATGGGGTATAAGAAACTTTCCAGATATTGCTCTGATAGCAATGGTTCATTACAATCTGTAAATTCTGGCTCTAAGGGCAATGGAACCGTTAATGGCCATTCAACAGATGCAGATAACATTGGAATGGTTATTGTTAAAGATATTGTCTCGAAAGATGTTATTGCCCAATTCCTTGCCCACAAGAGTCCTATTTCAGCATTGTGCTTTGATCCTAGTGGCACCATTTTAGTGACAGCTTCCATTCAGGGTCATAATATAAATGTTTTCAAGATAATGCCTGCAAGTGGGACTTTGTCAGCTTCTGTTGTTGGTCGTTCTTATGTTCATTTGTACAGGTTGCAACGTGGCTTTACTAATGCGGTTATACAAGATATCAGTTTCAGTGATGACAGCAAGTGGATTATGATTAGTTCTTCAAGGGGAACTAGCCATCTATTTGCCATAAATCCTCAAGGAGGACATGTAAATATTCAGCCCTTTGATGATAGTTTTACAGCAAAAAATAGTGGATTAGGCACTACAACTAATCATGCAGTTTGTCAGTCTCATAGTTCGGCCATGCAAATGCCTAAACAGCAGAGCCTGTTTGCTACTGGCCCTCCGATCACACTTTCTGTTGTAAGCAGAATTAGGAATGGAGCTAATGGCTGGAGAGGCACCGTAAGTGGTGCTGCTGCAGCTGCAACTGGTAGGAAAAATGCCCTTTCTGGGGCTATTGCTTCATCTTTCTGTAACTATAAAGGCAATGAAGGCAACTTTTCCAAGGCAAAGTATCAACTGTTGGTCTTTTCACCCACTGGTTCCATGGTACAATATGCTCTGAGGACAATAACTGGTCAAGATTCAGCTGTTGTTTCTGGATTGTCCCCTGCTTATGAATCCATTCCACAGGCTGATACAAGATTAGTTGTTGAGGCTATCCATAAATGGAATATATGTCATATTCGGAGAGAGCGAGAAGATAATGTAGACATATATGGTGAGAATGGAATTTCAGACGTTAATAAAATATATCCAGAGGAAGTGAGGGAGAAGATAGACACCATTAGCCCAAAAATCAAGAATGGAGTCATGAAAGTGAATCCCTGTCTTGAGGAGGAGCATCATTTGTATATTTCAGAAGCTGAACTGCAAATGCATCAAGCTCAGACTCCGTTGTGGGCAAAGCCAGAGATATATTTTCATTCAATGTTGCAAGAATCTACCATAATGGATGAAGAAGCAGCTGCTTCAGGAGGTGAATTTGAGATTGAAAGGATTCCAACTTGCATGATCGAAGCTAGATCAAAGGACTTGGTTCCAATTTTCGACTATATTCAGACTCCAAAAGTACAACAAACAAGGTTTGATGACAACTTAATTCAATTTTAG 2412 0.4175 MIDGEFEESLIIIVLWISAILVCLVMGMRNDAQKQQLLHQGNGGGRTNGFIPSSFRALSSYLRVVSSGASTVARSAASVASSIVERDDDPDHDQVIWAGFDKLEGEGEVIQQVLLLGYRSGFQVWHVDESNNVRDLISRHDGPVSFMQMVPNPIASKRSQDKYANSRHLLVVCTDGFFAGGNNVQGGSTIPYNGSTSNSHDQINGNYLPTTVRFYSMKSQSYVHVLKFRSVIYSVRCSSRVVAVSQSTQIHCFDATTLEREYTLLTNPIVMSCPGSGGIGYGPLAVGPRWLAYSGSPIAISNSGHVCPQQLTPSARFPGFSSNGRLIAHYAKESSKHLASGIVTLGDMGYKKLSRYCSDSNGSLQSVNSGSKGNGTVNGHSTDADNIGMVIVKDIVSKDVIAQFLAHKSPISALCFDPSGTILVTASIQGHNINVFKIMPASGTLSASVVGRSYVHLYRLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGGHVNIQPFDDSFTAKNSGLGTTTNHAVCQSHSSAMQMPKQQSLFATGPPITLSVVSRIRNGANGWRGTVSGAAAAATGRKNALSGAIASSFCNYKGNEGNFSKAKYQLLVFSPTGSMVQYALRTITGQDSAVVSGLSPAYESIPQADTRLVVEAIHKWNICHIRREREDNVDIYGENGISDVNKIYPEEVREKIDTISPKIKNGVMKVNPCLEEEHHLYISEAELQMHQAQTPLWAKPEIYFHSMLQESTIMDEEAAASGGEFEIERIPTCMIEARSKDLVPIFDYIQTPKVQQTRFDDNLIQF 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02536 803 SUPERFAMILY WD40 repeat-like 113 496 IPR036322 GO:0005515
Gma13g02536 803 Gene3D - 92 531 IPR015943 GO:0005515
Gma13g02536 803 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 28 797 IPR045142 GO:0006914
Gma13g02536 803 SMART WD40_4 453 494 IPR001680 GO:0005515
Gma13g02536 803 SMART WD40_4 397 437 IPR001680 GO:0005515
Gma13g02536 803 SMART WD40_4 219 254 IPR001680 GO:0005515
Gma13g02536 803 Pfam Breast carcinoma amplified sequence 3 546 781 IPR022175 -
Gma13g02536 803 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 28 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02536 Gma-Chr13 40224224 40230688 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02536 - - gmx:100784596 1540.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02536 13 40224224 40230688 Gma13g02536 13 40224224 40230688 ECH
Gma13g02536 13 40224224 40230688 Gma12g02021 12 40875267 40881194 GST
Gma13g02536 13 40224224 40230688 Gma12g01227 12 16147999 16154433 PCT
Gma13g02536 13 40224224 40230688 Gma06g02460 06 46942247 46947713 PCT
Gma12g01227 12 16147999 16154433 Gma13g02536 13 40224224 40230688 PCT
Gma06g02460 06 46942247 46947713 Gma13g02536 13 40224224 40230688 PCT