Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01227 ATGAGTAAGAATGATGGCCAGAAACCACAGCATCTTCTTCTTGGAGGTGTTGCAGCTGCTGCTGCTGGCAGTGTTAGCGGTGGCAGAACCAACAACAATGGATTTATTCCCTCCTTTCGTACTCTCTCTGGTTACCTGAAGATTGTTTCATCTGGTGCTTCTACTGTTGCTCGGTCTGCGGCTTCCTCTTTTGCATCGTCGATTTTGGATAAGGGTGATGCTGCTGACTGTGATCGGGTTATTTGGGCTGGGTTTGACACATTAGAGGGCCAGGGAGAAGTCATGCGGCAAATACTTCTTCTAGGCTATTGGTCCGGTTTCCAGGTTTGGGATGTTAATGATTCAAATAATGTCCGTGACCTAGTTTCCCGACAGGATGGTCCTGTTTCTTTTATGCAAATGGTACCAACTCCAATTGTATCAAAGAGACCAGAGGATAAGTATGCAGGCAAGCATCCATTGTTGGTAATTTGTATGGATGGTGGAGGCAAAACACAAGATGGGTTGGGTGCCACTTGCAAAGGGGGCACTTTAAACCATCATGACCAAGTGAATGGGAACTATCTGCCAACTACTGTTCAATTTTATTCTATGAGGTCCCAATCATATGTTCATGTACTAAAGTTTAGATCAGTTGTTTACTCTGTAAGATGTAGTTCTCGAATAGTAGCTGTTTCTCAAGCCACTCAGATACACTGTTTTTCTGCCACAACTTTAGAAAGAGAGTATACTTTACTTACCAATCCTATAGTCACACCTTGTTTTGGTTCTGGAGGCATTGGCTTTGGACCGCTTGCAGTTGGTCCTAGATGGCTGGCCTATAGTGGAAGCCCAGATGCAACAGCCACTTCTGGGCGTGTCCGCCCACAGCATTTGACACCTTCTGCAAGCTTTCCTGGTATTTCTTCAAATGCGAGCTTGGTCGCTCACTATGCCAAAGAGTCTAGCAAGCATCTTGCTGCTGGGATTGTGACACTTGGAGATATGGGGTATAAAAAACTTTCCAGATACTGTTCGGAACTTCGCCCAGATAGCAGCAGTTCTATACAATTGGTAAATTCTAGCCCAAAAGGAAATGGAATCGTTAATGGCCATTCAACAGATGCAGATAACATTGGGATGGTCATTGTCCGAGATATAGTCAGTAAAAATGTCGTTTCCCAATTCCGGGCCCACAAGAGTCCTATTTCAGCTTTATGCTTTGATCCTAGTGGCACCATATTGGTGACTGCTTCTGTTCAGGGGCACAATATTAATGTTTTTAAGATAATCCCTGGATATGAGAGAGTGTCAGCATCTGATGCTGGCCCTTCTTATGTTCATCTCTACAGGCTGCAACGTGGCTTGACAAATGCAGTTATTCAAGATATCAGTTTTAGTGCTGATAGCAGGTGGATTATGATTAGTTCCTCAAGGGGCACTAGCCATCTATTTGCTATAAACCCTCAAGGGGGACCTGTAAATATTCTGTCATGTGACAATAGTTTAACAGAAAAAAATGGTGGATTGGATGTCATGAATAATCAAGCAGTTTGTTGGCCTCATAGTTCAGCCTTAGAAATTTGTAAACCACAGAGCCTCTGTACTGCTGGTCCTCCTATCACACTTTCTGTGGTAAGCAGAATTAGGAATGGATCTAATGGCTGGAGAAGCACGGTAACTGGTGCTGCTGCAGCTGCAACAAATAGGATGAGTTCCCTTTCTGGGGCTATTGCTTCATCTTTCCGTAACTTTGAAGGCAACAGTACCTTGTATGTTAATGGGAACTATTCCAAGGAAAAGCGTCATCTGTTGGTATTTTCACCCACCGGTTCTATGATACAATATGCTCTGCAGACAATTAACAGTCAAGATTCAGGTGTTGTTTCTGGAGTAACACCTGCGTATGAATCTGCCCCAGCGACTGATGTAAGAGTAGTTGTTGAGCCTATCAAGAAATGGAATATAAGTCAGAGACAAAGTTGGAGAGAGGGAGAAGATAATATTGACATATATGGAGAGAATGTAGTTTCAGACAGCAATAAATTATATTCAGAGGAAGTGAAGAAGGATAATATCATTAGCCCTAAAATGAAGAATGTAGCTGTGAAATGGAATTCCTGTTCTGAGAAAGAGCATCAGTTATATATTTCAGAAGCTGAACTGCAAATGCATCAAGCTAAGACACCATTGTGGGGAAAGACTGGGATATATTTTCATTCAGTGGGTAAAGAGGCTATTCTGATGATGGATGAAGAAGCTGCTTCTGGAGGGGAATTTGAGATTGACAAGATTCCAACTCGTGTAATACAAGCTAGGTCAAAAGACTTGGTTCCAATTTTTGATTATATTCAGACCTCAAAATTTCAACAAATAAGGACTCCTGCTGTGGGTAACGTGTTATATGAACAGCTTCTGCGTCAAAGTTCCTTTGAAAATGGAAGGATTTCAACCAGGGGTTTTTTGAGTTCTCCTGATTGCATACCTAATTCCGAATTTAAAAGTATGATTGAAGGAAGTGAGTGGGGTGATAGTTTGCTTTCAGCAAAAACAAAGGCTTTCGTAAATAAAAACAACACCCTTAAACCAAATACTTGGCCAGAGATTGCAAATAATAGAAGAGAGAACTTAAACATGAATGCTCATCAAATCTTTGTAAATAGTGACAGAAAAGGCCTGAAACTGGAGAATCACTGCAAAGAAAAAGGAGATGAATTTGATTGA 2703 0.4169 MSKNDGQKPQHLLLGGVAAAAAGSVSGGRTNNNGFIPSFRTLSGYLKIVSSGASTVARSAASSFASSILDKGDAADCDRVIWAGFDTLEGQGEVMRQILLLGYWSGFQVWDVNDSNNVRDLVSRQDGPVSFMQMVPTPIVSKRPEDKYAGKHPLLVICMDGGGKTQDGLGATCKGGTLNHHDQVNGNYLPTTVQFYSMRSQSYVHVLKFRSVVYSVRCSSRIVAVSQATQIHCFSATTLEREYTLLTNPIVTPCFGSGGIGFGPLAVGPRWLAYSGSPDATATSGRVRPQHLTPSASFPGISSNASLVAHYAKESSKHLAAGIVTLGDMGYKKLSRYCSELRPDSSSSIQLVNSSPKGNGIVNGHSTDADNIGMVIVRDIVSKNVVSQFRAHKSPISALCFDPSGTILVTASVQGHNINVFKIIPGYERVSASDAGPSYVHLYRLQRGLTNAVIQDISFSADSRWIMISSSRGTSHLFAINPQGGPVNILSCDNSLTEKNGGLDVMNNQAVCWPHSSALEICKPQSLCTAGPPITLSVVSRIRNGSNGWRSTVTGAAAAATNRMSSLSGAIASSFRNFEGNSTLYVNGNYSKEKRHLLVFSPTGSMIQYALQTINSQDSGVVSGVTPAYESAPATDVRVVVEPIKKWNISQRQSWREGEDNIDIYGENVVSDSNKLYSEEVKKDNIISPKMKNVAVKWNSCSEKEHQLYISEAELQMHQAKTPLWGKTGIYFHSVGKEAILMMDEEAASGGEFEIDKIPTRVIQARSKDLVPIFDYIQTSKFQQIRTPAVGNVLYEQLLRQSSFENGRISTRGFLSSPDCIPNSEFKSMIEGSEWGDSLLSAKTKAFVNKNNTLKPNTWPEIANNRRENLNMNAHQIFVNSDRKGLKLENHCKEKGDEFD 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01227 900 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 24 867 - -
Gma12g01227 900 Gene3D - 95 497 IPR015943 GO:0005515
Gma12g01227 900 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 24 867 IPR045142 GO:0006914
Gma12g01227 900 SMART WD40_4 200 235 IPR001680 GO:0005515
Gma12g01227 900 SMART WD40_4 382 422 IPR001680 GO:0005515
Gma12g01227 900 SMART WD40_4 438 479 IPR001680 GO:0005515
Gma12g01227 900 SUPERFAMILY WD40 repeat-like 192 484 IPR036322 GO:0005515
Gma12g01227 900 Pfam Breast carcinoma amplified sequence 3 531 772 IPR022175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01227 Gma-Chr12 16147999 16154433 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01227 - - gmx:100791837 1751.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01227 12 16147999 16154433 Gma12g01227 12 16147999 16154433 ECH
Gma12g01227 12 16147999 16154433 Gma06g02460 06 46942247 46947713 GST
Gma13g02536 13 40224224 40230688 Gma12g01227 12 16147999 16154433 PCT
Gma12g02021 12 40875267 40881194 Gma12g01227 12 16147999 16154433 PCT
Gma12g01227 12 16147999 16154433 Gma13g02536 13 40224224 40230688 PCT
Gma12g01227 12 16147999 16154433 Gma12g02021 12 40875267 40881194 PCT