Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02021 ATGATTGAAGGTGAATTTGAGGAATCGTTGATTATTTTTGTGTTGTGGGTTGGTGCTATTTTGGTGTGTTTGGTGATGGGGATGAGGAATGATGCACAGAAGCAACAGCTTCTTCATCAGGGTAATGGTGGTGCTGGTGGTGGTGGTGGCAGAACCAACGGCTTCATTCCAAGTTCTTTCCGTGCTCTCTCTAGCTACCTCAGAATTGTTTCCTCTGGTGCTTCCACTGTTGCACGTTCTGCTGCATCGGTTGCATCATCCATTGTGGAGAGGGATGATGACCCTGACCATGATCAGGTTATCTGGGCTGGGTTTGACAAGTTAGAGAGTGAGGGTGAAGTTATTCAACAAGTACTTCTTCTAGGTTATCGATCTGGATTCCAGGTTTGGCATGTTGATGAATCAAACAATGTTCGAGACCTGGTTTCCAGACATGATGGTCCTGTTTCGTTTATGCAAATGGTACCTAATCCAATTGCGTCTAAGAAATCCGAAGACAAGTATGCAAACAGCCGCCAGCTGTTGGTAGTTTGTACTGATGGGTTCTTTGCTGGAAGTAACAATGTTCAGGATGGGTCGACCACCCCTTACAATGGAAGCACTACAAACTCCCATGACCAAATAAATGGAAGCTATCTGCCAACTACCGTTCGGTTTTATTCTATGAAATCCCAATCTTACGTTCATGTACTGAAGTTTAGATCAGTTGTTTATTCTGTGAGGTGCAGTTCTCGGGTAGTTGCGGTTTCTCAGTCCACTCAGATACACTGTTTTGATGCTACCACATTAGAAAGGGAATATACTTTACTTACCAATCCTATAGTAATGAGTTGCCCTGGTTCCGGAGGCATAGGTTATGGACCACTTGCTGTGGGACCAAGATGGCTTGCTTATAGTGGAAGTCCAGTTGCAATCTCCAATTCAGGACATGTGTGTCCACAACAGTTGACACCTTCTGGAAGCTTTCCTGGTTTTTCTTCTAATGGGAGCTTGATTGCACATTATGCCAAAGAGTCCAGCAAGCATCTTGCTTCTGGGATTGTGACCCTTGGAGACATGGGGTATAAGAAACTTTCCAGATATTGCTCTGATAGCAATGGTTCATTACAATCTGTAAATTCTGTCTCTAAGGGCAATGGAACTATTAATGGCCATTCAACTGATGCAGATAACATTGGAATGGTTATTGTTAAAGATATTGTCTCAAAAAATGTTATTGTGCAATTCTGGGCCCACAAGAGTCCTATTTCAGCATTGTGCTTTGATCCTAGTGGCACCATTTTAGTGACAGCTTCCATTCAAGGTCATAATATAAATGTTTTCAAGATAATGCCTGCAAGTGAGAATTTGCCAGCATCTGTTACTGGTCCTTCTTATGTTCATTTGTATAGGTTGCAACGCGGCTTTACAAATGCGGTTATACAAGATATCAGTTTCAGTGATGACAGCAAGTGGATTATGATTAGTTCTTCAAGGGGAACTAGCCATCTATTTGCCATAAATCCTCAAGGAGGACATGTAAATATCCAGTCCTTTGATGATAGTTTTACGGCAAAAAATAGTGGATTAGGCACTACAACTAATCATGCAGTTCGTCGGTCTCATAGTTCGGCCATGCAAATGCCTAAACAGCAGAGCCTGTTTGTTACTGGCCCTCCAATCACACTTTCTGTTGTAAGCAGAATTAGGAACGGAGCTAATGGCTGGAGAGGCACTGTAAGCGGTGCTGCTGCAGCTGCAACTGGTAGGAAAAATGCCCTTTCTGGGGCCATTGCTTCATCTTTCCGTAACTATAAAGGCAATGAAGGGAACTTTCCTAAGGCAAAGTATCAGCTGTTGGTCTTTTCACCCTCTGGTTCCATGGTACAATATGCTTTGAGGACAATAACTGGTCAAGATTCAGCTGTTGTTTCTGGATTGTCCCCTGCTTATGAATCCATTCCACAGGCTGATACAAGATTAGTAGTTGAGGCCATCCATAAATGGAATATATGTCAGAGTCATAGTCGGAGAGAGCGAGAAGATAATGTAGACATATATGGTGAGAATGGAATTTCAGACGTCAATAAAATATATCCAGAGGAAGTGGGGGAGGAGAAAAACACTAGCCCGAAAATCAAGAATGGAGTTATGAAAGTGAATCTCTGTCTTGAGGAGGAGCATCTTTTGTATATTTCAGAAGCTGAACTGCAAATGCATGAAGCTCAGACTTCATTGTGGGCAAAGCCAGTGATATATTTTCATTCAATGTTGCAAGAATCTACCATAATGGATGAAGAAGCAGCTGCTTCAGGAGGTGAATTTGAGATTGAAAGTATGCCAACTTGCATGATTGAAGCTAGATCGAAAGACTTGGTTCCGATTTTCGACCATATTCAGACTCCAAAAGTACCACAAACAAGGACTCCTGCTATGGATAGCAAGACAAATGAACAGCTGTTGCATCGCAGTTCTAGGCTGGCCGGAAATGGCAGGATTTCACCCAGGACTATTTTGGAATCTCCTGAGAGTGTGACTAAGGCTGGTGATGCTGTTTCTGAATTTAGAAGTGGAATTGAAGGAACTGAGTGGGATAATCATTTGGTGGCATCTGAAACTTTGAACTTTGTAAATAACAATGACACCTTTAGACCAAATACTCAGCATGAGATTAAAATGGAGATGAATTTGATTGGAGGCATGGAAATATTGTTTCATTTGGCACTGGAGGCTTAA 2715 0.4221 MIEGEFEESLIIFVLWVGAILVCLVMGMRNDAQKQQLLHQGNGGAGGGGGRTNGFIPSSFRALSSYLRIVSSGASTVARSAASVASSIVERDDDPDHDQVIWAGFDKLESEGEVIQQVLLLGYRSGFQVWHVDESNNVRDLVSRHDGPVSFMQMVPNPIASKKSEDKYANSRQLLVVCTDGFFAGSNNVQDGSTTPYNGSTTNSHDQINGSYLPTTVRFYSMKSQSYVHVLKFRSVVYSVRCSSRVVAVSQSTQIHCFDATTLEREYTLLTNPIVMSCPGSGGIGYGPLAVGPRWLAYSGSPVAISNSGHVCPQQLTPSGSFPGFSSNGSLIAHYAKESSKHLASGIVTLGDMGYKKLSRYCSDSNGSLQSVNSVSKGNGTINGHSTDADNIGMVIVKDIVSKNVIVQFWAHKSPISALCFDPSGTILVTASIQGHNINVFKIMPASENLPASVTGPSYVHLYRLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGGHVNIQSFDDSFTAKNSGLGTTTNHAVRRSHSSAMQMPKQQSLFVTGPPITLSVVSRIRNGANGWRGTVSGAAAAATGRKNALSGAIASSFRNYKGNEGNFPKAKYQLLVFSPSGSMVQYALRTITGQDSAVVSGLSPAYESIPQADTRLVVEAIHKWNICQSHSRREREDNVDIYGENGISDVNKIYPEEVGEEKNTSPKIKNGVMKVNLCLEEEHLLYISEAELQMHEAQTSLWAKPVIYFHSMLQESTIMDEEAAASGGEFEIESMPTCMIEARSKDLVPIFDHIQTPKVPQTRTPAMDSKTNEQLLHRSSRLAGNGRISPRTILESPESVTKAGDAVSEFRSGIEGTEWDNHLVASETLNFVNNNDTFRPNTQHEIKMEMNLIGGMEILFHLALEA 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02021 904 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 28 874 - -
Gma12g02021 904 SUPERFAMILY WD40 repeat-like 118 501 IPR036322 GO:0005515
Gma12g02021 904 Pfam Breast carcinoma amplified sequence 3 551 787 IPR022175 -
Gma12g02021 904 Gene3D - 115 519 IPR015943 GO:0005515
Gma12g02021 904 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 28 874 IPR045142 GO:0006914
Gma12g02021 904 SMART WD40_4 224 259 IPR001680 GO:0005515
Gma12g02021 904 SMART WD40_4 458 499 IPR001680 GO:0005515
Gma12g02021 904 SMART WD40_4 402 442 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02021 Gma-Chr12 40875267 40881194 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02021 - - gmx:100784596 1549.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02021 12 40875267 40881194 Gma12g02021 12 40875267 40881194 ECH
Gma13g02536 13 40224224 40230688 Gma12g02021 12 40875267 40881194 GST
Gma12g02021 12 40875267 40881194 Gma12g01227 12 16147999 16154433 PCT
Gma12g02021 12 40875267 40881194 Gma06g02460 06 46942247 46947713 PCT
Gma12g01227 12 16147999 16154433 Gma12g02021 12 40875267 40881194 PCT
Gma06g02460 06 46942247 46947713 Gma12g02021 12 40875267 40881194 PCT