Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02460 ATGGGTAAGAATGATGGCAAGAAACAACAGCACCTTCTTCTTGGAGGTGTTGCTGCTGGTGGTAGTGGTGGCAGAACCAACATCAATGGCTTTATTCCCTCCTTTCACACTCTCTCTGGTTACCTGAAAATTGTTTCATCGGGTGCTTCCACTGTTGCTCGGTCTGCTGCTGCCTCTTTTGCGTCATCAATTTTGGATAAGGATGATGATGCTGACCGTGATCGGGTTATTTGGGCTGGGTTTGACACATTAGAGGGCGGCCATGGAGAAGTCATGCGGCAAGTACTTCTTCTAGGCTATTGGTCTGGTTTCCAGGTTTGGGATGTTGATGATTCAAATAATGTCCGTGACCTAGTTTCCAGACAGGATGGTCCTGTTTCTTTTATGCAAATGGTACCAACTCCAATTGTATCAAAGAAACCAGAGGACAAGTTTGCAGACAAGCGTCCATTGTTGGTAGTTTGTACGGATGGTTTGTTGGCTGGAGGAGACAAAACACAAGATGGGTTGGGTGCCACTTGCAATGGGGGCACTTTAAACCGTCATGCCCAAGTGAATGGAAACTATCTGCCAACTACTGTTCAATTTTATTCTATGAGGTCCCGAACAAATGTTCATGTACTAAAGTTTAGATCAGTTGTTTATTCTGTAAGATGCAGTTCTCGAATAGTAACTGTTTCTCAAGCTACTCAGATACACTGTCTTTCTGCCACAACTTTAGAAAGAGAGTATACTTTACTTACCAATCCTATTGTCACTCATTGTCTCGGTTCTGGAGGCATTGGCTTTGGACCACTTGCAGTGGGTCCTAGATGGCTGGCCTATAGTGGAAGCCCAGATGCAACAGCCACTTCTGGGCATGTCAGCCCACAGCATTTGACACCTTCTGCAAGCTTTCCTGGTTTTTCTTCAAATGGGAGTTTGGTCGCACACTATGCCAAAGAGTCTAGCAAGCATCTTGCTGCTGGGATTGTGACACTTGGAGATATGGGGTATAAAAAACTTGCCAGATACTGCTCGGAACTTCGCTCAGATAGCAGCGGTTCTATACATTTGGTAAATTCTAGCCCAAAAGGAAATGGAATCGTTAATGGCCATTCAACAGATGCGGATAACATTGGGATGGTCATTGTCAGAGATATAGTCAGTAAAAATGTCATTTCCCAATTCCGGGCCCACAAGAGTCCTATTTCAGCTTTATGCTTTGATCCTAGTGGGACCATATTGCTGACTGCTTCTGTTCAGGGACACAACATTAATGTTTTTAAGATAATCCCTGGATATGAGAGAGTGTCAGCATCTGATGCTGACCCTTCTTATGTTCATCTCTACAGGCTGCAACGTGGCTTGACAAATGCAGTTATTCAAGATATCAGTTTTAGTGCTGATAGCAGGTGGATTATGATAAGTTCCTCAAGGGGCACTAGCCATCTATTTGCTATAAATCCTCAAGGAGGACCTGTAAGTATTCTGTCATGTGACAATAGTTTAACAGAAAAAAATGGTGGATTGGATATCATTAATAATCAAGCAGTTCGTTGGCCTCATAGTTCAGCCTTAGAAATTTGTAAACCACAGAGCCTCTGTGCTGCTGGTCCTCCAATCACACTTTCTGTCGTAAGCAGAATTAGGAATGGATCTAATGGTTGGAGAAGCACGGTAACCGGAGCTGCTGCAGCTGCAACAAATAGGATGAGTTCCCTTTCTGGGGCTATTGCTTCATCTTTCCGTAACTTTAAAGACAGCAGTACCTTGTATGTTAATGGGAACTATTCCAAGGAAAAGCATCATCTGTTGGTCTTTTCACCCACCAGTTCTATGATACAATATGCTCTGCAGACAATTAACAGTCAAGACTCAGGTGTTGTTTCTGGAGTAACACCTGCTTATGAATCTGCCCCACTGACCGATGCAAGAGTAGTTGTTGAGCCTATCAAGAAATGGAATATAAGCCTGGCATATAGTTGGAGAGAGGGAGAAGATACTATTGACATATATGGAGAGAATGGAGTTTCAGACAGCAATAAATTATATTCAGAGGAAGTGAAGAAGGATAATATCATTAGCCCTAAAATGAAGAATGTAACTGTGAAATGGAATCCCTGTTCTGAGAAAGAGCATCAGTTTTATATTTCAGAAGCTGAACTGCAAATGCATCAAGCTAAGACGCCATTGTGGGGAAAGACTGGGATATATTTTCATTCAGTGGGTAAAGAGGCTACTTTGATGATGGATGAAGAAGCTGCTCTCGAAGGGGAATTTGAGATCGAAAAGATTCCAACTCGTGTGATACAAGCTAGGTCAAAAGACTTGGTTCCAATTTTTGACTATATTCAGACCTCAAAATTTCAACAAATAAGGACTCTTGTTAATAACAAGTTAAATGAACAACTTCTGCATCAAAGTTCCTTTGAAAAGGGAAGGATTTCACCCAGGGGCATTTTGGGTTTTCCTGATTGCATAAATAATTCTGGTGAAACGATTGCTGAGTTTAAAAGTGGGATTGAAGGAAATGAGCGGGGTGATAGTTTGATTCCAGCAGAAACAAAGGCTTTCGTAAATAACAATAACACCCTTAAACCAAATACTTGGCCAGAGATTGTAAATAATAGAAGAGAGAACTTAAACATGGATGTTCATCAAATGTTTGTAAATAGTGACAGAAAAGGCCTGAAACTGGAGAATCACTGCAAGGAAAAAGGAGATGAATTTGAATGA 2718 0.4169 MGKNDGKKQQHLLLGGVAAGGSGGRTNINGFIPSFHTLSGYLKIVSSGASTVARSAAASFASSILDKDDDADRDRVIWAGFDTLEGGHGEVMRQVLLLGYWSGFQVWDVDDSNNVRDLVSRQDGPVSFMQMVPTPIVSKKPEDKFADKRPLLVVCTDGLLAGGDKTQDGLGATCNGGTLNRHAQVNGNYLPTTVQFYSMRSRTNVHVLKFRSVVYSVRCSSRIVTVSQATQIHCLSATTLEREYTLLTNPIVTHCLGSGGIGFGPLAVGPRWLAYSGSPDATATSGHVSPQHLTPSASFPGFSSNGSLVAHYAKESSKHLAAGIVTLGDMGYKKLARYCSELRSDSSGSIHLVNSSPKGNGIVNGHSTDADNIGMVIVRDIVSKNVISQFRAHKSPISALCFDPSGTILLTASVQGHNINVFKIIPGYERVSASDADPSYVHLYRLQRGLTNAVIQDISFSADSRWIMISSSRGTSHLFAINPQGGPVSILSCDNSLTEKNGGLDIINNQAVRWPHSSALEICKPQSLCAAGPPITLSVVSRIRNGSNGWRSTVTGAAAAATNRMSSLSGAIASSFRNFKDSSTLYVNGNYSKEKHHLLVFSPTSSMIQYALQTINSQDSGVVSGVTPAYESAPLTDARVVVEPIKKWNISLAYSWREGEDTIDIYGENGVSDSNKLYSEEVKKDNIISPKMKNVTVKWNPCSEKEHQFYISEAELQMHQAKTPLWGKTGIYFHSVGKEATLMMDEEAALEGEFEIEKIPTRVIQARSKDLVPIFDYIQTSKFQQIRTLVNNKLNEQLLHQSSFEKGRISPRGILGFPDCINNSGETIAEFKSGIEGNERGDSLIPAETKAFVNNNNTLKPNTWPEIVNNRRENLNMDVHQMFVNSDRKGLKLENHCKEKGDEFE 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02460 905 SUPERFAMILY WD40 repeat-like 186 483 IPR036322 GO:0005515
Gma06g02460 905 Pfam Breast carcinoma amplified sequence 3 532 773 IPR022175 -
Gma06g02460 905 Gene3D - 92 494 IPR015943 GO:0005515
Gma06g02460 905 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 13 872 IPR045142 GO:0006914
Gma06g02460 905 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 13 872 - -
Gma06g02460 905 SMART WD40_4 439 480 IPR001680 GO:0005515
Gma06g02460 905 SMART WD40_4 383 423 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02460 Gma-Chr6 46942247 46947713 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02460 - - gmx:100778343 1762.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02460 06 46942247 46947713 Gma06g02460 06 46942247 46947713 ECH
Gma12g01227 12 16147999 16154433 Gma06g02460 06 46942247 46947713 GST
Gma13g02536 13 40224224 40230688 Gma06g02460 06 46942247 46947713 PCT
Gma12g02021 12 40875267 40881194 Gma06g02460 06 46942247 46947713 PCT
Gma06g02460 06 46942247 46947713 Gma13g02536 13 40224224 40230688 PCT
Gma06g02460 06 46942247 46947713 Gma12g02021 12 40875267 40881194 PCT