Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02518 ATGGCCGCCACATTCCCTTCCTCCGACATCCACGACCTCCGCTCGCCGATGCTACCAGCGGCGGCGGTGGCGGCGAAGAAGCCGGCGATGGAGAAGCTCTGCATCGACGACATGCTGCAGAAACACTGCGGCGAGTTCGGGCGGTGGCAGCTCAAGCACTTCATCCTCACCAGCCTCGCGTGGGCGCTCGAGGCCTTTCACACCATGGTCATGATCTTCGCCGACCGCGAACCGGACTGGAAGTGCGTCGCCGGCGCCGCCTGCGACGGCGGCGACTTGTGCGGTCTCTCGCCGGAGTCGAGGGAGTGGATCGGCGGCCGCGGCGGCTCCACGGTTTCCGATTGGGGTTTGATTTGCGGAGATAAGTTTAAGGTTGGATTGGTGCAGGCTGTTTtcttctttggctgcatgattgGTGCTGGAACATTTGGCCACCTCTCAGACTCCTCTTTAGGAAGGAAAGGCTCTCTCACAGTGGTTTGTGCCCTAAACACCATCTTCGGCTGCTTAACAGCCCTGTCCCCAAACTACTGGATCTACGTCCTCCTCCGCCTCCTCACCGGCTTCAGCAGCGGTGGCGTCGGCCTCACTGCCTTCGTCCTTGCCACCGAACCAATCGGCCCAACCAAACGTGGTGCAGCGGGTATGTCCACCTTCTACTTCTTCTCCGGTGGCATTGCACTTCTCTCAGGCATCGCCTACATCTTCCAAACATGGCGCTATCTATACATAGCTTCCTCCATCCCCTCCTTCCTCTACATCATCCTTGTCCTTCCCTTTATCTCCGAGTCTCCAAGATGGTACCTCATTCGTGGCAAAGTTACCGAAGCCATGAAACTCATGTCCACCATTGCTTCTTCCAATGGTAAACACCTTCCTGATGGTGTTCTCCTTGCACTTGACAACGAAACATCGCCCACAACAAACCAAGGTTCAGGCTATGACATAACAGAAATCATGACTTACAAAAACGAAAACAAAGATGCACTTATTGGGTCCATCATAGACGTGGTTTGTTCACCCATCACTCGTATGAGGTTGTTCATTGCGGTGGCTCTTAATTTCCTAGCCTCTGTGGTGTACTATGGGCTTAGTTTAAACGTCATGAACCTGGAAACCAACCTTTACGTGAACGTGATGCTGAACTCGGTGGCGGAGATGCCAGCCTTTACGATAACGGCGGTGCTTCTGGACCGGTTTGGACGGAAGCCATTGACGGTGGCAACGATGTGGTTCAGTGGGTTCTTTTGCTTGATGGGGAGTTTGGTGAGCAACGTTGGGGTGTGGAAGGTGGTGAGAATGGTGTGTGGTGTTTTGGGGATATTTGGGATGGCGGGGACTTATAATTTGCTGTTTATTTACACGGCGGAGCTGTTTCCGACAGTGGTGAGGAACGCCGCGCTCGGGTGTACTACTCAAGCGGCGCAAATGGGAGCGATATTGGCGCCGTTTGTGGTCGTTTTGGGAGGGTATTTGCCGTTTGCGGTGTTTGCAGCATGTGGGATAGTGGGAGGGATGTTTGCGTTTAATCTTCCCGAGACTCTAAACCAACCTCTCTATGATACATTTGGTGGACTGGAAGCTGGACTTGCTTGA 1596 0.5338 MAATFPSSDIHDLRSPMLPAAAVAAKKPAMEKLCIDDMLQKHCGEFGRWQLKHFILTSLAWALEAFHTMVMIFADREPDWKCVAGAACDGGDLCGLSPESREWIGGRGGSTVSDWGLICGDKFKVGLVQAVFFFGCMIGAGTFGHLSDSSLGRKGSLTVVCALNTIFGCLTALSPNYWIYVLLRLLTGFSSGGVGLTAFVLATEPIGPTKRGAAGMSTFYFFSGGIALLSGIAYIFQTWRYLYIASSIPSFLYIILVLPFISESPRWYLIRGKVTEAMKLMSTIASSNGKHLPDGVLLALDNETSPTTNQGSGYDITEIMTYKNENKDALIGSIIDVVCSPITRMRLFIAVALNFLASVVYYGLSLNVMNLETNLYVNVMLNSVAEMPAFTITAVLLDRFGRKPLTVATMWFSGFFCLMGSLVSNVGVWKVVRMVCGVLGIFGMAGTYNLLFIYTAELFPTVVRNAALGCTTQAAQMGAILAPFVVVLGGYLPFAVFAACGIVGGMFAFNLPETLNQPLYDTFGGLEAGLA 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02518 531 Pfam Sugar (and other) transporter 122 520 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma13g02518 531 ProSitePatterns Sugar transport proteins signature 2. 186 211 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma13g02518 531 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 35 529 - -
Gma13g02518 531 ProSiteProfiles Major facilitator superfamily (MFS) profile. 53 516 IPR020846 GO:0022857
Gma13g02518 531 SUPERFAMILY MFS general substrate transporter 114 519 IPR036259 -
Gma13g02518 531 Gene3D MFS general substrate transporter like domains 109 523 IPR036259 -
Gma13g02518 531 ProSitePatterns Sugar transport proteins signature 1. 393 409 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma13g02518 531 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 35 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02518 Gma-Chr13 40090299 40094811 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02518 11 527 Organic Solute Cotransporters AT3G20660 68.726 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02518 K08202 - gmx:100797665 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02518 13 40090299 40094811 Gma13g02518 13 40090299 40094811 ECH
Gma13g02518 13 40090299 40094811 Gma12g02041 12 41018664 41022386 GST
Gma13g02518 13 40090299 40094811 Gma12g01263 12 17228254 17233687 PCT
Gma13g02518 13 40090299 40094811 Gma06g02418 06 46280211 46283548 PCT
Gma12g01263 12 17228254 17233687 Gma13g02518 13 40090299 40094811 PCT
Gma06g02418 06 46280211 46283548 Gma13g02518 13 40090299 40094811 PCT