Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02418 ATGCGTGCGACGTTGCCCAGCGAATCCAAAGACCGGGGCACCGATCCGTCCCGGTCACCGCTCATTCCAGCGACGGAGAAAAAGCCCGCCGGAGCATCGGCATCGGAGAAGCTATGCATCGACGAGATGCTGCAGAAGTACTGCGGCGAGTTCGGGCGGTGGCAGCTGAAGCACTTCATCTTAACGAGTCTGGCGTGGGCGTTGGAGGCGTTCCACACGATGGTTATCATATTCGCGGACCGCGAGCCGGAGTGGCAGTGCCTCGACGGCGCGGCCGGGTCGGGATGCGACCCGGCCGCGAAGAACGTGTGCCGGTTCGAACCGGGCTCGTGGAAGTGGGTCGGGGACTCCACGGTGGCGGAGTGGGGGCTTTTTTGCGGTGACAAGTTTAAGGTTGGACTGGTTCAGGCCGTATTCTTCGGCGGCTGCATGATCGGTGCTGGAATATTCGGTCACCTCTCAGACTCATTCCTCGGAAGAAAAGGGTCACTCACAGTGGTCTGTGCCCTAAACACCGTATTTGGAACCCTAACGGCCTTTTCTCCCAGCTACTCCTTCTATGTCCTCTTCCGCCTCCTCACCGGCTGCAGCACCGGTGGCGTCGGCCTCTGCGCCTTCGTCCTCGCCACCGAGCCGGTGGGCCCCAAAATGCGCGGTACGGTCGGCATGTCCACCTTCTACTTCTTCTCCTCCGGCATTGCCCTCCTCTCCGCCATAGCCTACATCTTCCCCGCATGGCGCAATCTCTACATAGTCTCCTCCCTCTCGTCCCTCGTCTTCCTCGTCTTCGTCCTCCCCTTCGTCTCGGAGTCCCCGAGATGGTACCTCGTACGAGGAAGAAAATCGGAGGCCATGAAAATCATGTCCACCATCGCCACCTCCAATGGTAACCACCTTCCACAAGGTGTTATTCTCACCATGGACAACCAAGAACCATTATCATTACCATTATCACCATCATCCTTATCATATCATGTGTCAGTGACAACAACCACTGACACGTGCATGAAAGAACAACATTTATTTAAAGATATTAATCCCTTAAATAAACTTCAGTTATCATGTCAGGTGGCAATGACGGGATCTTTACTTGACGTGATCCGCACGCCAATGACACGTGCCCGATTAGTCCTCGCTGTTGTTATCAACTTCTTATGCTCCGTTGTGTACTATGGATTAAGCCTCAACGTGGTGAACCTCGAGACCAACCTCTACCTCACGGTGATCCTCAACGCTGTCGCGGAGATGCCGGCGTTTATGATAACGGCGATGTTACTCGACCGGTGGGGGAGGAAGCCGTTAACCATAGGAACCTTATGGTTCAGCGGTGCATTTTGCTTTGCGGGGAGCTTGGTGAACAACGTTGGGGTGTGGAAAGGTGTGAGAGTGGTGTGTGGGATTTTGGGGATTTTTGGGATGGCGGGGACTTATAATTTGTTGTTTATTTACACGGCGGAGCTGTTCCCGACGGTGGTGAGGAACGCCGCGCTCGGCTGCGCCACGCAGGCGGCGCAGATGGGTGCCATACTGGCGCCGCTGGTTGTCGTTTTGGGTGGGTCGTTGCCGTTTTTGGTGTTCGCTTTGTGCGGAATAGTTGGGGGCGTTTTCGCGTTTTATCTGCCAGAGACCCTGAACCAACCTCTCTATGATACGTTAACTGGAATGGAGGCCAAGGAAAATACTGCTATCTCAACCAAAGTATGA 1704 0.5499 MRATLPSESKDRGTDPSRSPLIPATEKKPAGASASEKLCIDEMLQKYCGEFGRWQLKHFILTSLAWALEAFHTMVIIFADREPEWQCLDGAAGSGCDPAAKNVCRFEPGSWKWVGDSTVAEWGLFCGDKFKVGLVQAVFFGGCMIGAGIFGHLSDSFLGRKGSLTVVCALNTVFGTLTAFSPSYSFYVLFRLLTGCSTGGVGLCAFVLATEPVGPKMRGTVGMSTFYFFSSGIALLSAIAYIFPAWRNLYIVSSLSSLVFLVFVLPFVSESPRWYLVRGRKSEAMKIMSTIATSNGNHLPQGVILTMDNQEPLSLPLSPSSLSYHVSVTTTTDTCMKEQHLFKDINPLNKLQLSCQVAMTGSLLDVIRTPMTRARLVLAVVINFLCSVVYYGLSLNVVNLETNLYLTVILNAVAEMPAFMITAMLLDRWGRKPLTIGTLWFSGAFCFAGSLVNNVGVWKGVRVVCGILGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAAQMGAILAPLVVVLGGSLPFLVFALCGIVGGVFAFYLPETLNQPLYDTLTGMEAKENTAISTKV 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02418 567 ProSiteProfiles Major facilitator superfamily (MFS) profile. 58 545 IPR020846 GO:0022857
Gma06g02418 567 Pfam Sugar (and other) transporter 377 549 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma06g02418 567 Pfam Sugar (and other) transporter 129 296 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma06g02418 567 MobiDBLite consensus disorder prediction 1 15 - -
Gma06g02418 567 Gene3D MFS general substrate transporter like domains 59 551 IPR036259 -
Gma06g02418 567 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 352 559 - -
Gma06g02418 567 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 40 314 - -
Gma06g02418 567 ProSitePatterns Sugar transport proteins signature 1. 422 438 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma06g02418 567 SUPERFAMILY MFS general substrate transporter 125 548 IPR036259 -
Gma06g02418 567 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 352 559 - -
Gma06g02418 567 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 40 314 - -
Gma06g02418 567 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02418 Gma-Chr6 46280211 46283548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02418 10 562 Organic Solute Cotransporters AT3G20660 62.410 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02418 K08202 - gmx:100814182 1112.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02418 06 46280211 46283548 Gma06g02418 06 46280211 46283548 ECH
Gma12g01263 12 17228254 17233687 Gma06g02418 06 46280211 46283548 GST
Gma13g02518 13 40090299 40094811 Gma06g02418 06 46280211 46283548 PCT
Gma12g02041 12 41018664 41022386 Gma06g02418 06 46280211 46283548 PCT
Gma06g02418 06 46280211 46283548 Gma13g02518 13 40090299 40094811 PCT
Gma06g02418 06 46280211 46283548 Gma12g02041 12 41018664 41022386 PCT