Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01263 ATGCCAACGACGTCTTCCAGCGAATCCAAAGACCGGAACGCCGATCCGTCCCGGTCACCGCTCATTTCGGCGGCAGAGAAGCCCACCGGAGAGTCGTCGAAGTCGGAGAAGCTATGCATCGATGAGATGCTGCAGAGGTACTGCGGCGAATTCGGGCGCTGGCAGCTGAAGCACTTCATCTTAACGAGCCTGGCGTGGGCGCTGGAGGCGTTCCACACGATGGTGATCATATTCGCGGACCGCGAGCCGGAGTGGCGGTGCCTCGACGGCCCGGCCGGGTTACGGTGCGACCCGGCCGCGAAGAGCGTGTGCCGGCTCGAACCGGGCTCTTGGAAGTGGGTCGGGGACTCCACGGTGGCGGAGTGGGACTTGTTTTGCGGTGACAAGTTTAAGGTTGGGCTGGTTCAGGCCGTCTTCTTCGGCGGCTGCATGATCGGTGCTGGAATATTTGGTCACCTCTCAGACTCATTCCTCGGAAGAAAAGGCTCACTCACAGTGGTCTGTGCCCTAAACACCGTGTTTGGCACCTTAACAGCCTTCTCCCCCAACTACTCCTTCTACGTCCTCTTCCGCCTCCTCACCGGCTGCAGCACCGGTGGCGTCGGCCTCTGCGCCTTCGTCCTCGCCACCGAGCCGGTGGGCCCCAAAATGCGGGGTGCAGTTGGCATGTCCACCTTCTACTTCTTCTCCTCCGGCATCGCCCTCCTCTCCGTCCTTGCCTACATCTTCCCCGCATGGCGCAATCTCTACATTGCCTCCTCCATCCCCTCCCTCCTTTTCCTCGTCTTCGTCCTCCCCTTTATCTCAGAGTCCCCGAGATGGTACCTCGTACGAGGAAGAAAATCGGAGGCCATGAAAATCATGTCCACCATTGCCACCTCCAACGGTAACAACCTTCCACGAGGTGTTGTTCTCACCCTCGACGACCAACCACCACTACTACCTTCGTCACCATTATCATGTCATGTGTCACATGTAGAACATTCCGACACATGCATGAAAGAACAACATTTGTTTGAAAATATTAATCCCCTAAATAGATATCAGTCATCATGTCACGTGGCAGTGACGGGATCTCTACTTGACGTTATCCGCACGCCAATGACACGTGCGCGATTAGTCCTTGCTATTGTTATCAACTTCTTATGCTCGGTGGTGTACTATGGCTTGAGCCTCAACGTGGTGAACCTAGAGACCAACCTCTACCTCACCGTGATCCTCAACGCCGTCGCGGAGATGCCGGCGTTTATGATAACGGCACTCTTACTCGACCGGTGGGGGAGGAAGCCGTTAACCATAGGAACCTTATGGTTCAGCGGCGCGTTTTGCTTGGCGGGGAGTTTGGTGAACAACGTTGGGGTGTGGAAAGGTGTGAGAATGGTGTGTGGGATTTTGGGAATTTTTGGGATGGCGGGGACTTATAATTTGTTGTTTATTTACACGGCGGAGCTGTTCCCGACGGTGGTGAGGAACGCCGCGCTCGGCTGCGCCACGCAGGCGGCGCAGATGGGGGCCATATTGGCGCCTCTGGTCGTCGTTTTGGGAGGGTCGTTGCCGTTTATGGTGTTTGCTCTGTGCGGAATAGGTGGTGGCGTTTTCGCGTTTTATCTGCCAGAGACGCTGAATCAACCTCTCTATGATACGTTAACGGGAATGGAGGCCAAGGAAAGTAATGCTACCTCAACCAATGTATGA 1695 0.5575 MPTTSSSESKDRNADPSRSPLISAAEKPTGESSKSEKLCIDEMLQRYCGEFGRWQLKHFILTSLAWALEAFHTMVIIFADREPEWRCLDGPAGLRCDPAAKSVCRLEPGSWKWVGDSTVAEWDLFCGDKFKVGLVQAVFFGGCMIGAGIFGHLSDSFLGRKGSLTVVCALNTVFGTLTAFSPNYSFYVLFRLLTGCSTGGVGLCAFVLATEPVGPKMRGAVGMSTFYFFSSGIALLSVLAYIFPAWRNLYIASSIPSLLFLVFVLPFISESPRWYLVRGRKSEAMKIMSTIATSNGNNLPRGVVLTLDDQPPLLPSSPLSCHVSHVEHSDTCMKEQHLFENINPLNRYQSSCHVAVTGSLLDVIRTPMTRARLVLAIVINFLCSVVYYGLSLNVVNLETNLYLTVILNAVAEMPAFMITALLLDRWGRKPLTIGTLWFSGAFCLAGSLVNNVGVWKGVRMVCGILGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAAQMGAILAPLVVVLGGSLPFMVFALCGIGGGVFAFYLPETLNQPLYDTLTGMEAKESNATSTNV 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01263 564 ProSitePatterns Sugar transport proteins signature 1. 419 435 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma12g01263 564 Gene3D MFS general substrate transporter like domains 113 548 IPR036259 -
Gma12g01263 564 MobiDBLite consensus disorder prediction 1 30 - -
Gma12g01263 564 ProSiteProfiles Major facilitator superfamily (MFS) profile. 58 542 IPR020846 GO:0022857
Gma12g01263 564 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 40 315 - -
Gma12g01263 564 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 349 557 - -
Gma12g01263 564 SUPERFAMILY MFS general substrate transporter 53 545 IPR036259 -
Gma12g01263 564 Pfam Sugar (and other) transporter 129 295 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma12g01263 564 Pfam Major Facilitator Superfamily 387 539 IPR011701 GO:0022857|GO:0055085
Gma12g01263 564 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 40 315 - -
Gma12g01263 564 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 349 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01263 Gma-Chr12 17228254 17233687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01263 10 560 Organic Solute Cotransporters AT3G20660 63.538 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01263 K08202 - gmx:100805613 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01263 12 17228254 17233687 Gma12g01263 12 17228254 17233687 ECH
Gma12g01263 12 17228254 17233687 Gma06g02418 06 46280211 46283548 GST
Gma13g02518 13 40090299 40094811 Gma12g01263 12 17228254 17233687 PCT
Gma12g02041 12 41018664 41022386 Gma12g01263 12 17228254 17233687 PCT
Gma12g01263 12 17228254 17233687 Gma13g02518 13 40090299 40094811 PCT
Gma12g01263 12 17228254 17233687 Gma12g02041 12 41018664 41022386 PCT