Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02041 ATGACAAGTGCTGAGATGATACCCACCGCGCTGTCCATTGAAACCAGTGACCAGAGCAATGACCTCCGGTCGTCGCCGGTGAAGAAAATGTCTGTGGACGAGATGCTCCAGCAATACTGCGGCGAGTTCGGGAAGTGGCATCTTAGGCACTTTGTGCTCACCAATCTTTCATGGGTTTTGCTAGGATTTCACATCATGGTCATGATTTTTGCCGACCATGAACCCTACTGGAGTTGCCACGCCGGCTCCGTCGGTTCCGGTTGCAACGCGGCCGCCACGAGCATCTGCCAACTCAAACCGGGTTCGTGGGAGTGGGTCGGTGGCCACGGCGGCACCACCGTGTCGGAGTGGGGTTTAATTTGTGGTAACAAGTATAAGGTTGGGTTGGTCCGGGCCGTGTTCTTTGTCGGCTGGATGATTGGTGGTGGAGTATTTGGGCACCTCTCAGACTCCTTTCTTGGAAGGAAACATAGCCTTGGAGTAGCGAGTGCCCTAAACGCCATCTTTGGGTGCCTAACAGCACTATCTCCTAACTACTGGATCTACGTCGTATTTCGCCTTCTCACAGGTTTCAGCAGCGGTGGGGTCGCCCTGTGTGCCTACGTCCTTGCATCTGAACCAATCGGCCCCAAGAAGCGCGGTGCCATTGGCATGTGCACCTTCTACTTCTTCTCAGGAGGCATTGCAGTTCTCTCTGGCATCGCTTACATCTTCCAAACGTGGCGCTATCTCTACATAGCCTCCTCCATACCCTCCTTTCTCTACACATTCCTTGTCTTTCCCTTTCTATTCGAGTCCCCGAGATGGTACCTCGTTCGCGGAAGAGTAAGCGAGGCAATGAAGCTCATGTCTGCCATTGCTTCTTCCAACGGAAAACACCTTCCCGAGGGCATTCTCCTCGCGCTCGACGAAGAAGTGAACAATGAATCCTCGTGTCAGGGCCGAAATTCACAAGATGAAAGGTTAGAAAACAAGGGTGGCGCGCGTGTTGGATCCATCGTAGACATTGTCCGCTGCCCCACCACACGGGTGCGGCTATTAATCGCCATGATGCTTAATTTCTTGTGCGATTTTGTTTACTACGGCCTTAGCTTAAACGTGGTGAACTTGAAAAATAACCTGTACTTGAACGTGTTGCTTAACGCGGTGGGGGAGATGCCAGCATTTGTGATAACGACGGTGCTTTTGGGCAAGTTTAACTTTGGAAGGAAACCCTTGACGGTGGCAACAATGTGGTTCAGCGGGTTCTTTTGTTTGATTGCAAGTTTAATGAAAAACGTTGGGGTGTGGAAGATTTTGAGAATGGTGTGTGGTGTTTTGGCGGTGTCTGGGATGGCAGGGACTTATAATTTGTTGTATATTTACACAACAGAGTTGTTTCCAACAGTGGTGAGGAACACAGCGCTTGGGTTTACTACACAGACGGCTCAAATGGGAGCCATGTTGGCACCGTTTGTGGTGGTTTTGGGTGGTTGGTTGACCTTTGCAGTGCTTGCAGCTTGTGGGATAATGGGAGGAGTGTTTGCTCTTGTTCTTCCAGAGACATCAAACCAACCCCTCTATGATACATTCAGTGGATTGGAAGCTGGACTTGCGTGA 1599 0.5078 MTSAEMIPTALSIETSDQSNDLRSSPVKKMSVDEMLQQYCGEFGKWHLRHFVLTNLSWVLLGFHIMVMIFADHEPYWSCHAGSVGSGCNAAATSICQLKPGSWEWVGGHGGTTVSEWGLICGNKYKVGLVRAVFFVGWMIGGGVFGHLSDSFLGRKHSLGVASALNAIFGCLTALSPNYWIYVVFRLLTGFSSGGVALCAYVLASEPIGPKKRGAIGMCTFYFFSGGIAVLSGIAYIFQTWRYLYIASSIPSFLYTFLVFPFLFESPRWYLVRGRVSEAMKLMSAIASSNGKHLPEGILLALDEEVNNESSCQGRNSQDERLENKGGARVGSIVDIVRCPTTRVRLLIAMMLNFLCDFVYYGLSLNVVNLKNNLYLNVLLNAVGEMPAFVITTVLLGKFNFGRKPLTVATMWFSGFFCLIASLMKNVGVWKILRMVCGVLAVSGMAGTYNLLYIYTTELFPTVVRNTALGFTTQTAQMGAMLAPFVVVLGGWLTFAVLAACGIMGGVFALVLPETSNQPLYDTFSGLEAGLA 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02041 532 Gene3D MFS general substrate transporter like domains 48 524 IPR036259 -
Gma12g02041 532 ProSiteProfiles Major facilitator superfamily (MFS) profile. 50 517 IPR020846 GO:0022857
Gma12g02041 532 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 32 530 - -
Gma12g02041 532 SUPERFAMILY MFS general substrate transporter 124 520 IPR036259 -
Gma12g02041 532 Pfam Sugar (and other) transporter 124 521 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma12g02041 532 ProSitePatterns Sugar transport proteins signature 2. 188 213 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma12g02041 532 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 32 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02041 Gma-Chr12 41018664 41022386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02041 20 528 Organic Solute Cotransporters AT3G20660 60.461 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02041 K08202 - gmx:100794967 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02518 13 40090299 40094811 Gma12g02041 12 41018664 41022386 GST
Gma12g02041 12 41018664 41022386 Gma12g01263 12 17228254 17233687 PCT
Gma12g02041 12 41018664 41022386 Gma06g02418 06 46280211 46283548 PCT
Gma12g01263 12 17228254 17233687 Gma12g02041 12 41018664 41022386 PCT
Gma06g02418 06 46280211 46283548 Gma12g02041 12 41018664 41022386 PCT