Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01269 ATGTCTCCAGCAATGGTAGGAAGTGGTGAGAAGGGTGAGAGTGATACACCAGGAAGTCAATATCAGAAAGGAGTGAAGCAGCTCGTTGACAATGGCCTTCACACAATACCTAAAAAGTACATACTCCCTCCTTCTGATCGACCTGCTACAAATTCAGAAGATTCAAATGTTGCCAAGCAAAACCTTCAGCTACCCATCATTGATTTTTCTGAATTGCTTGGTCCAAGAAGGCCCCAAGTCCTTCAATCCATAGCCAATGCTTGCGAACGGTACGGATTTTTTCAGCTGGTAAACCATGGCATCTCAGATGATGTTATCAGCAGCGTGAGGGATGTGAGTTGCAGGTTCTTCGATCTTCCTCTTGAGGAAAGAGCCAAACACATGACAACTGATATGCGTGCACCAGTCAGATATGGAACAAGCTTTAGCCAAACCAAAGACACTGTATTCTGTTGGAGGGACTTCTTGAAACTCCTCTGCCATCGCTTGCCTGATTTCCTCCCCCATTGGCCTGCTTCCCCCTTAGACTTTAGGAAAGTGATGGCTACCTACTCGGAAGAAACCAAATACTTATTTCTGATGTTGATGGAAGCTATCCAAGAGAGCTTAGGAATCATAACAGAAGGAAACAACCAAGAAGAGAAGACAGAAGGAAAAGACAATAATATTATGAAAGACTTGGAAGATGGGAGCCAGATGATGGTGGTCAATTTCTACCCACCATGCCCTGAACCAGACCTAACCTTGGGGATGCCCCCTCACTCTGATTATGGATTCCTCACACTCCTCCTCCAAGACCAGGTGGAGGGTTTGCAAATCCAATTCCAAGGTCAATGGTTCACTGTTCAACCTATCAATAACGCTTTCGTTGTCAATGTTGGTGATCACCTAGAGATATACAGCAACGGGAAATACAAGAGCGTGTTACATAGGGTTATTGTTAATGCAGAAAAGAAAAGGACATCTGTAGCTTCGCTGCATAGCCTTCCTTTCAACTGCACCGTGAGACCGTCACCCAAACTCATTGACGAAGCCAACCCCAAACGTTACGCAGACACGAATTTTGATACTTTTCTTGCCTACGTTTCCACCAGAGAGCCAAAGAGAAAGGAATTCCTGGACTCTAGGAAATTGACTTCTACATGA 1146 0.4476 MSPAMVGSGEKGESDTPGSQYQKGVKQLVDNGLHTIPKKYILPPSDRPATNSEDSNVAKQNLQLPIIDFSELLGPRRPQVLQSIANACERYGFFQLVNHGISDDVISSVRDVSCRFFDLPLEERAKHMTTDMRAPVRYGTSFSQTKDTVFCWRDFLKLLCHRLPDFLPHWPASPLDFRKVMATYSEETKYLFLMLMEAIQESLGIITEGNNQEEKTEGKDNNIMKDLEDGSQMMVVNFYPPCPEPDLTLGMPPHSDYGFLTLLLQDQVEGLQIQFQGQWFTVQPINNAFVVNVGDHLEIYSNGKYKSVLHRVIVNAEKKRTSVASLHSLPFNCTVRPSPKLIDEANPKRYADTNFDTFLAYVSTREPKRKEFLDSRKLTST 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01269 381 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 229 329 IPR005123 -
Gma13g01269 381 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 15 378 - -
Gma13g01269 381 Pfam 2OG-Fe(II) oxygenase superfamily 232 327 IPR044861 -
Gma13g01269 381 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 15 378 - -
Gma13g01269 381 MobiDBLite consensus disorder prediction 1 26 - -
Gma13g01269 381 PRINTS Isopenicillin N synthase signature 84 101 - -
Gma13g01269 381 PRINTS Isopenicillin N synthase signature 254 275 - -
Gma13g01269 381 PRINTS Isopenicillin N synthase signature 289 315 - -
Gma13g01269 381 SUPERFAMILY Clavaminate synthase-like 23 363 - -
Gma13g01269 381 Pfam non-haem dioxygenase in morphine synthesis N-terminal 64 162 IPR026992 -
Gma13g01269 381 Gene3D - 18 361 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01269 Gma-Chr13 27025605 27029510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01269 22 358 Glycosyltransferase AT5G59530 34.294 3.20e-55 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01269 - - gmx:100818253 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00576 10 6037762 6041235 Gma13g01269 13 27025605 27029510 GST
Gma19g01777 19 47041041 47044682 Gma13g01269 13 27025605 27029510 PCT
Gma03g01727 03 43374534 43377029 Gma13g01269 13 27025605 27029510 PCT
Gma13g01269 13 27025605 27029510 Gma19g01777 19 47041041 47044682 PCT
Gma13g01269 13 27025605 27029510 Gma03g01727 03 43374534 43377029 PCT