Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00576 ATGTCTCCAGCAATGGTGGTAGGAAGTGGTGAGAAGGGTGAGAGTGATACACCAGGAAATCAATATCAGAAAGGAGTGAAACAGCTTGTTGAGAATGGCCTTCACACAATACCTAAAAAGTACATACTTCCTCCTTCTGATCGACCAGCTACAAATTCAGAAAATTCAAATGTTGCCAAGCAAAACCTTCAGCTACCCATCATTGATTTTTCTGAATTGATTGGTCCAAGAAGGCCCCAAGTCCTTCAATCTCTAGCCAATGCTTGTGAACGCTACGGATTTTTTCAGCTGGTAAACCATGGCATATCAGATGATGTTATAAGCAGCATGAGGGATGTGAGTGGCAGGTTCTTCGATCTTCCTTTTGAGGAAAGAGCCAAACACATGACAACTGATATGCATGCACCGGTTAGATATGGAACAAGCTTCAGCCAAACCAAAGATACTGTGTTCTGTTGGAGGGACTTCTTGAAACTCCTCTGCCATCCCTTGCCTGATTTCCTCCCTCATTGGCCTGCTTCCCCCTTAGACTTTAGGAAAGTGGTGGCTACCTACTCAGAAGAAACAAAATACTTATTTCTGATGTTGATGGAAGCTATCCAAGAGAGCCTAGGAATCAAAGTAGAAGTCAAGAAGCAAGAAGAGGAGACAGAAGGAAATGACAATAATATTCTGAAGGACTTGGAAGATGGGAGCCAGATGATGGTGGTCAATTTCTACCCACCATGCCCTGAACCAGACCTAACCTTGGGGATGCCCCCTCATTCTGATTATGGATTCCTCACACTCCTCCTCCAAGACCAGGTGGAGGGTTTGCAAATCCAATTCCAAGGTCAATGGCTCACTGTCAAACCTATCAATAACGCTTTCGTTGTCAATGTTGGTGATCACCTAGAGATATACAGCAACGGGAAATACAAGAGCGTGTTACATAGGGTTATTGTTAATGCAATGAAGAAAAGGACATCTGTGGCTTCGCTGCATAGCCTTCCTTTCAACTGCACCGTAAGACCGTCACCCAAACTCATTGACGAAGCCAACCCCAAACGTTACGCAGACACGAATTTTGATACTTTTCTTGCATACGTTTCCACCAGAGAGCCAAAGAGAAAGGAATTCCTGGACTCTAGGAAATTGTCTTCTACATGA 1149 0.4404 MSPAMVVGSGEKGESDTPGNQYQKGVKQLVENGLHTIPKKYILPPSDRPATNSENSNVAKQNLQLPIIDFSELIGPRRPQVLQSLANACERYGFFQLVNHGISDDVISSMRDVSGRFFDLPFEERAKHMTTDMHAPVRYGTSFSQTKDTVFCWRDFLKLLCHPLPDFLPHWPASPLDFRKVVATYSEETKYLFLMLMEAIQESLGIKVEVKKQEEETEGNDNNILKDLEDGSQMMVVNFYPPCPEPDLTLGMPPHSDYGFLTLLLQDQVEGLQIQFQGQWLTVKPINNAFVVNVGDHLEIYSNGKYKSVLHRVIVNAMKKRTSVASLHSLPFNCTVRPSPKLIDEANPKRYADTNFDTFLAYVSTREPKRKEFLDSRKLSST 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00576 382 SUPERFAMILY Clavaminate synthase-like 24 364 - -
Gma10g00576 382 Gene3D - 19 362 IPR027443 -
Gma10g00576 382 PRINTS Isopenicillin N synthase signature 85 102 - -
Gma10g00576 382 PRINTS Isopenicillin N synthase signature 255 276 - -
Gma10g00576 382 PRINTS Isopenicillin N synthase signature 290 316 - -
Gma10g00576 382 MobiDBLite consensus disorder prediction 1 21 - -
Gma10g00576 382 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 230 330 IPR005123 -
Gma10g00576 382 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 16 379 - -
Gma10g00576 382 Pfam non-haem dioxygenase in morphine synthesis N-terminal 65 163 IPR026992 -
Gma10g00576 382 Pfam 2OG-Fe(II) oxygenase superfamily 233 328 IPR044861 -
Gma10g00576 382 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 16 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00576 Gma-Chr10 6037762 6041235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00576 23 359 Glycosyltransferase AT5G59530 34.104 8.69e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00576 - - gmx:100805175 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00576 10 6037762 6041235 Gma10g00576 10 6037762 6041235 ECH
Gma10g00576 10 6037762 6041235 Gma13g01269 13 27025605 27029510 GST
Gma19g01777 19 47041041 47044682 Gma10g00576 10 6037762 6041235 PCT
Gma03g01727 03 43374534 43377029 Gma10g00576 10 6037762 6041235 PCT
Gma10g00576 10 6037762 6041235 Gma19g01777 19 47041041 47044682 PCT
Gma10g00576 10 6037762 6041235 Gma03g01727 03 43374534 43377029 PCT