Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01727 ATGGCACTAAATGAGCAAAAGGGCAAGGATGATATCCCAGAAAGTCAATATCAGAAAGGAGTGAAGCAGTTGTGTGAGAAAGGTCATCTTAATGCAGTACCTAAAAAGTACATACTTCCTGTTTCCGAAAGACCCACCAAGAGTAGTGTGGAAGATCCAAATGTTGTGAAGCAAAATCTTCAGTTACCCATCATTGATTTTGCCGAATTGCTTGGTCCAAATAGGCCCCAAGTCCTTCAATCCCTAGCCAATGCTTGTCAACAGTATGGATTTTTCCAGCTGGTAAATCATTGCATGTTGGAGGATGTTGTGAGGAGCATGATAGATGTGAGTGGTAGGTTCTTCGATCTCCCTTTAGAGGAGAGAGCTAAGTACATGACAACTGATATGCGAGCACCGGTTCGATGTGGGACCAGCTTCAGCCAAACCAAAGACACTGTGTTGTGTTGGAGGGATTTCTTGAAACTTCTGTGCCATCCCTTACCAGATTTCCTCCCCCATTGGCCTGCTTCACCAGTGGACTTTCGGAAAGTGGTGGGCACCTACGCAGAAGAAACCAAACATTTGTTCCTGGTGGTAATGGATGCCATCCTAGAGAGCTTAGGAATCATGGAAGACAATATTCTGAAAGACTTTGAAAATGGGAGCCAAATGATGGTAGCCAATTTCTACCCAGCATGCCCTCAACCAGACCTTACACTTGGGATACCCCCTCACTCCGATTATGGCTTCCTCACTCTTCTCCTACAAGACGAGGTAGAAGGCTTGCAAATCCAACACCAAGACAAATGGATCACTGTTCAACCCATTCCCAATGCCTTCGTTGTCAATGTTGGTGATCACTTAGAGATATATAGCAATGGAAAATACAAGAGCGTATTGCATAGAGTTGTGGTGAATGAAGCTAAGAGTAGGGTGTCGGTGGCTTCGCTGCATAGCCTTCCATTCAACTGCACGGTGAGACCGTCGCCAAAACTCGTTGACGAAGCGAATCCCAAGCGTTACATGGACACTGATTTTAGGACCTTTCTTGCGTACGTATCCTCCAGAGAGCCTAAAAAAAAGGATTTCCTGGAGTCTAGAAAAGTTGCATTAAATTGA 1101 0.4496 MALNEQKGKDDIPESQYQKGVKQLCEKGHLNAVPKKYILPVSERPTKSSVEDPNVVKQNLQLPIIDFAELLGPNRPQVLQSLANACQQYGFFQLVNHCMLEDVVRSMIDVSGRFFDLPLEERAKYMTTDMRAPVRCGTSFSQTKDTVLCWRDFLKLLCHPLPDFLPHWPASPVDFRKVVGTYAEETKHLFLVVMDAILESLGIMEDNILKDFENGSQMMVANFYPACPQPDLTLGIPPHSDYGFLTLLLQDEVEGLQIQHQDKWITVQPIPNAFVVNVGDHLEIYSNGKYKSVLHRVVVNEAKSRVSVASLHSLPFNCTVRPSPKLVDEANPKRYMDTDFRTFLAYVSSREPKKKDFLESRKVALN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01727 366 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 160 IPR026992 -
Gma03g01727 366 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 363 - -
Gma03g01727 366 Gene3D - 13 346 IPR027443 -
Gma03g01727 366 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 11 363 - -
Gma03g01727 366 SUPERFAMILY Clavaminate synthase-like 22 349 - -
Gma03g01727 366 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 214 314 IPR005123 -
Gma03g01727 366 Pfam 2OG-Fe(II) oxygenase superfamily 217 312 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01727 Gma-Chr3 43374534 43377029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01727 18 343 Glycosyltransferase AT5G59530 36.202 4.50e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01727 - - gmx:100782572 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01727 03 43374534 43377029 Gma03g01727 03 43374534 43377029 ECH
Gma19g01777 19 47041041 47044682 Gma03g01727 03 43374534 43377029 GST
Gma03g01727 03 43374534 43377029 Gma10g00576 10 6037762 6041235 PCT
Gma03g01727 03 43374534 43377029 Gma13g01269 13 27025605 27029510 PCT
Gma10g00576 10 6037762 6041235 Gma03g01727 03 43374534 43377029 PCT
Gma13g01269 13 27025605 27029510 Gma03g01727 03 43374534 43377029 PCT