Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00586 ATGAGTTCTCTGAATCTTGGAACATGGCCTCGTCCCACCTCTATGTTGAACACACCTTCACATCTCCTTCCCCCTTTTCACACTCTCACTCTCACAACAACGCTTCCCAAACTCGCAAGTGGAACCCCAAAACTAATATCTTCTTTTCCCCTCGTCTCTGCTGTGCCCACTAAGGAACACACAGTCACAACCCAGGAAATTCAACTCCAAGACACGCCGCTCAACTTCGATTTCAAGGGCTACATGATCGCCAAGGCCCACACGGTAAACCAAGCCTTGGACGCCGCCATTGCGTTGAGGGACCCACACAAGATCCACCAAGCCATGCGCTACTCCCTCCTCGCCGGCGGCAAGAGGGTCCGCCCCGTGCTCTGCATCGCCGCATGCGAGCTCGTCGGTGGCACAGAGGCCACCGCCATCCCCGCCGCCTGCGCCGTCGAGATGATCCACACCATGTCGCTCATCCACGACGACCTGCCATGTATGGACAACGACGACCTCCGCCGCGGAAAGCCGACCAACCACAAGGTCTACGGCGAGGACGTGGCGGTCCTCGCCGGCGACGCGCTCCTCGCCTTCGCGTTCGAGCACGTGGCAGCGTCCACGGAGGGAGTGTCGCCGTCACGCGTGGTTCGAGCGATTGGGGAATTAGCGAAGTCGATCGGTACGGAAGGGCTTGTGGCGGGACAAGTGGTGGATATAGATTCGGAGGGGGTGGCGAATGTGGGGCTGGAGACGCTGGAATTCATTCACGTGCACAAAACGGCGGCGTTGCTGGAAGCTGCGGTTGTGTTGGGGGCAATAGTGGGAGGTGGGAGCGACGAGGAGGTTGAGAAATTAAGGAAGTTCGCTAGGTGCATTGGGTTGTTGTTTCAGGTTGTGGACGACATTCTGGATGTTACGAAGTCGTCGGAGGAATTGGGGAAGACGGCGGGGAAGGATTTGGTGGCTGATAAGGTTACTTATCCCAAGCTATTGGGGATAGATAAGTCAAAGGAATTTGCTCAAGAATTGTTAAAGGATGCCAAGGAACAATTGTCTGGCTTCGATCCTCCAAAGGCGGCTCCCTTGTTTGCATTAACCAATTACATTGCTTATAGGCAAAATTAA 1110 0.555 MSSLNLGTWPRPTSMLNTPSHLLPPFHTLTLTTTLPKLASGTPKLISSFPLVSAVPTKEHTVTTQEIQLQDTPLNFDFKGYMIAKAHTVNQALDAAIALRDPHKIHQAMRYSLLAGGKRVRPVLCIAACELVGGTEATAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEHVAASTEGVSPSRVVRAIGELAKSIGTEGLVAGQVVDIDSEGVANVGLETLEFIHVHKTAALLEAAVVLGAIVGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLLGIDKSKEFAQELLKDAKEQLSGFDPPKAAPLFALTNYIAYRQN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00586 369 Gene3D Farnesyl Diphosphate Synthase 70 369 IPR008949 -
Gma11g00586 369 ProSitePatterns Polyprenyl synthases signature 2. 287 299 IPR033749 -
Gma11g00586 369 CDD Trans_IPPS_HT 105 367 IPR000092 GO:0008299
Gma11g00586 369 SFLD Polyprenyl Transferase Like 82 367 - -
Gma11g00586 369 ProSitePatterns Polyprenyl synthases signature 1. 154 170 IPR033749 -
Gma11g00586 369 SFLD Isoprenoid Synthase Type I 82 367 - -
Gma11g00586 369 Pfam Polyprenyl synthetase 104 340 IPR000092 GO:0008299
Gma11g00586 369 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC-LIKE 1 369 - -
Gma11g00586 369 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 1 369 - -
Gma11g00586 369 SUPERFAMILY Terpenoid synthases 79 351 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00586 Gma-Chr11 4899703 4901105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00586 K13789 - gmx:100778289 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00586 11 4899703 4901105 Gma11g00586 11 4899703 4901105 ECH
Gma11g00586 11 4899703 4901105 Gma01g01816 01 53761958 53762968 ECH
Gma01g01816 01 53761958 53762968 Gma11g00586 11 4899703 4901105 GST
Gma11g00586 11 4899703 4901105 Gma16g01298 16 31605435 31607112 PCT
Gma11g00586 11 4899703 4901105 Gma02g00537 02 5332989 5334509 PCT
Gma16g01298 16 31605435 31607112 Gma11g00586 11 4899703 4901105 PCT
Gma02g00537 02 5332989 5334509 Gma11g00586 11 4899703 4901105 PCT