Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00537 ATGAGTGCCCTCAATTTGAACGCATGGCCACGCCCCAGATCCAGATCCAGATCCCGATCCCCAACCTTTCACGCCGTCAATAAGTTACCCTTCTTCACCGTTACCAAACGGAGAGCATTCTCGCTCTCTGCGGTGCTCACGGTCGAGACGGAAGAGAAGCCACCAATCTTCGACTTCAAGAACTACATGCTTTCCAAAGCGTCCGCGGTCAACAAGGCCCTCGACGACTCCGTTTCGCTCCGCGAGCCCAAGAAGATCCACGAGGCGATGCGGTACTCGCTCCTCGCCGGCGGCAAGCGCGTGCGCCCTGTGTTATGCGTGGCGGCGTGCGAGCTCGTCGGCGGGCACGAGGCCACGGCGATGCCCGCCGCCTGCGCCCTCGAGATGATCCACACCATGTCGCTCATCCACGACGACCTCCCCTGCATGGACAACGACGATCTCCGCCGCGGCAAGCCCACCAACCACACGGTCTTCGGCGAGGACGTCGCCGTCCTCGCCGGCGACGCCCTCCTGGCCTTCGCCTTCGAGCACATCGCCGCCTCCACCCGGGGGGCCTCGGCGCCCCGGATCCTCCGCGCGATCGGCGAGCTCGCGCGGTCGATCGGCTCCGAGGGCCTCGTTGCCGGCCAGGTCGTCGACATCAACTCTGAGGGCCTGGCCGACGTTGGCCTAGAGCGCCTGGAGTTCATCCACGTCCACAAGACCGCCGCGCTCCTCGAGGGTGCGGTTGTCCTCGGCGCCATCCTCGGCGGCGGCACCGACGACGAGGTCGAAAAATTGAGAAAATTCGCTCGCTACATTGGTCTACTCTTTCAGGTTGTTGATGACATTCTCGATGTTACTAAGTCTTCCCAGGAATTGGGAAAGACCGCTGGAAAAGACCTTGTGGCTGATAAGGTTACTTACCCCAAGCTTTTGGGGATTGAGAAGTCTAAGGAGTTTGCTGCGAAACTGAACAAGGATGCTCAGGATCAGCTTGCTGGCTTTGACCCTGTTAAGGCTGCTCCTTTGATTGCTTTAGCCAATTACATTGCTTATAGGCAGAACTAG 1053 0.6011 MSALNLNAWPRPRSRSRSRSPTFHAVNKLPFFTVTKRRAFSLSAVLTVETEEKPPIFDFKNYMLSKASAVNKALDDSVSLREPKKIHEAMRYSLLAGGKRVRPVLCVAACELVGGHEATAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHTVFGEDVAVLAGDALLAFAFEHIAASTRGASAPRILRAIGELARSIGSEGLVAGQVVDINSEGLADVGLERLEFIHVHKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAAKLNKDAQDQLAGFDPVKAAPLIALANYIAYRQN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00537 350 CDD Trans_IPPS_HT 82 348 IPR000092 GO:0008299
Gma02g00537 350 SUPERFAMILY Terpenoid synthases 59 330 IPR008949 -
Gma02g00537 350 ProSitePatterns Polyprenyl synthases signature 1. 135 151 IPR033749 -
Gma02g00537 350 SFLD Isoprenoid Synthase Type I 62 348 - -
Gma02g00537 350 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC 41 350 - -
Gma02g00537 350 MobiDBLite consensus disorder prediction 1 21 - -
Gma02g00537 350 ProSitePatterns Polyprenyl synthases signature 2. 268 280 IPR033749 -
Gma02g00537 350 SFLD Polyprenyl Transferase Like 62 348 - -
Gma02g00537 350 Pfam Polyprenyl synthetase 84 320 IPR000092 GO:0008299
Gma02g00537 350 Gene3D Farnesyl Diphosphate Synthase 56 350 IPR008949 -
Gma02g00537 350 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 41 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00537 Gma-Chr2 5332989 5334509 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00537 K13789 - gmx:100782362 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00537 02 5332989 5334509 Gma02g00537 02 5332989 5334509 ECH
Gma02g00537 02 5332989 5334509 Gma16g01298 16 31605435 31607112 ECH
Gma16g01298 16 31605435 31607112 Gma02g00537 02 5332989 5334509 GST
Gma01g01816 01 53761958 53762968 Gma02g00537 02 5332989 5334509 PCT
Gma11g00586 11 4899703 4901105 Gma02g00537 02 5332989 5334509 PCT
Gma02g00537 02 5332989 5334509 Gma01g01816 01 53761958 53762968 PCT
Gma02g00537 02 5332989 5334509 Gma11g00586 11 4899703 4901105 PCT