Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00357 ATGGGCGCCGTTCAAGCTCAATATCCCTCCAATGTACTTTTCCTAAACAGCAAAACCGGGCAAGAAGCACATGATTATTCATTGCAATCTCCGCCAGGACAACAACTCCTTGATCAATCCCATATGCTATTCAACAACGGAGGTACTAATTCTCGAAAGAGAGGAAGAGAAACAACAACAGCAGCAGCTACCGGGATTGCGCCAAACGTTATCAACTCATTCTCTTTACAATCCCAATCTCCACAGGCACAACTCATAGACCTCACTCAACTTCATAATCATAATCAAAATGTAGTCTCCACCGGGTTACGCTTATCCTTTGGCGACCAACAACAACAAAGACAGCAATTACAACATCATCAACAACAGCATGGGTGTCACTCCTCTCCTTTCATATCTCTATTATCCGAAGAAGGCTTGTCTTCTCAAATCAAACAACAGCGTGACGAAATAGACCAATTCCTTCAAGCCCATGGGGAGCAATTGCGGCGGACATTAGCGGAGAAGAGGCAGAGACATTATCGGACGCTGCTAAGAGCAGCGGAGGAATCAGTGTTGCGGAGGCTGAGGGAGAAGGAAGCGGAGGTGGAGAAAGCCACGCGCCGCAATGCGGAGTTGGAGGCACGCGCGGCGCAGCTTAGCGTGGAGGCACAGCTTTGGCAGGCCAAGGCCAAGGCGCAGGAAGCGACGGCGGCGGCGTTGCAGGCGCAGCTGCACCAGGCTATGATGAGCAGCGGCGGCGGTGAGGACGGTGGTGGGGGAGGGCTATCGTGCGCCGGGGGCGAAGCGGAGGATGCTGAGTCAGCGTACGTTGACCCGGAGCGAGTGGGTCCCACTCCGAAATGTAGAGGGTGTGCGAAACGGGTGGCTTCGGTGGTGGTGTTGCCGTGTCGCCACCTATGCATCTGCGCCGAATGCGACGGGCATTTTCGGGCTTGCCCTGTTTGCCTCACCGTTAAAAATTCAACCATCCAAGTCTATCTATCTTAG 990 0.5313 MGAVQAQYPSNVLFLNSKTGQEAHDYSLQSPPGQQLLDQSHMLFNNGGTNSRKRGRETTTAAATGIAPNVINSFSLQSQSPQAQLIDLTQLHNHNQNVVSTGLRLSFGDQQQQRQQLQHHQQQHGCHSSPFISLLSEEGLSSQIKQQRDEIDQFLQAHGEQLRRTLAEKRQRHYRTLLRAAEESVLRRLREKEAEVEKATRRNAELEARAAQLSVEAQLWQAKAKAQEATAAALQAQLHQAMMSSGGGEDGGGGGLSCAGGEAEDAESAYVDPERVGPTPKCRGCAKRVASVVVLPCRHLCICAECDGHFRACPVCLTVKNSTIQVYLS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00357 329 ProSiteProfiles Zinc finger RING-type profile. 282 316 IPR001841 -
Gma11g00357 329 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 3 328 IPR017066 -
Gma11g00357 329 Coils Coil 179 237 - -
Gma11g00357 329 Pfam Zinc finger, C3HC4 type (RING finger) 281 318 - -
Gma11g00357 329 PIRSF SBP1_RNase_bind 1 329 IPR017066 -
Gma11g00357 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 262 329 IPR013083 -
Gma11g00357 329 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 3 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00357 Gma-Chr11 2873977 2875767 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00357 K19042 - gmx:100779548 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02059 01 55966503 55968597 Gma11g00357 11 2873977 2875767 GST
Gma11g00357 11 2873977 2875767 Gma17g01379 17 12742775 12744646 PCT
Gma11g00357 11 2873977 2875767 Gma05g00642 05 7013230 7014680 PCT
Gma17g01379 17 12742775 12744646 Gma11g00357 11 2873977 2875767 PCT
Gma05g00642 05 7013230 7014680 Gma11g00357 11 2873977 2875767 PCT