Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00201 ATGAAAGATTCGGATAAATTAACGTGGGATCAGGGTCGATGTCTGAGTCCCGCACAGGCACGTTCCTCGGCCTCACAGAAGCTTATGGTGTCGCTCATGTTCTTGGTTTCCCTCACCTACATGGCTTACACTCTAAAGCTGGTTTCCACGTCCACATCATCAAGCACGTGCAGCCACGCTCCTTTCATCATCAACCACCTCTTCCCTTCCTCAAACGTAACGGAGTGGCCGTCTTCATCCCAAACTTCCCGCACCGGAAAGGGGAAACGGCCGGGGCGCCAGAAAACGGAGCTCCGCCACCTGGTGTTCGGAATCGCGGCGTCATCGAAGCTATGGGAGCACAGAAAGAACTACATAAAGACTTGGTACAAGAAGGACAAGATGAGGGGAGTGGTGTGGCTGGACGATCGCGTGAAGACGAACCCAAAGGAAGGGTTGCCACCAACGAAGGTGTCCACCGACACCTCGAATTTCGTATACACCAACAAGCTGGGGCACCGCTCCGCGATTCGAATCTCCCGCATCGTGACGGAGACGCTGCGTATGGGGCACAAGGACGTGCGGTGGTTCGTCATGGGCGACGACGACACCGTTTTCGTGACGGACAATCTGCTGAGGATTTTAAACAAGTACGACCACAACTACATGTACTACATTGGGAGCTTGTCGGAGAGTCACTTGCAGAACATATTCTTCTCCTACGGCATGGCCTATGGTGGAGGCGGCTTCGCCATAAGCTACCCGTTGGCCAAAGCTCTGAGCAAAATGCAGGACCGCTGTATTCAGAGGTATCCTGCTCTCTATGGCTCCGATGATCGAATGCAAGCTTGTATGGCTGAACTCGGTGTTCCACTCACTAAGGAAATCGGTTTTCACCAGTATGATGTGTATGGGAACTTGTTTGGGCTTCTTGCAGCTCATCCAGTGACTCCATTGGTGTCACTGCACCACCTTGATGTGGTTGAGCCTATCTTCCCGAATGCCACCAGAGTAGAAGCCATTAAACGGCTAACCATTCCGATGAAGCTTGACTCAGCATCTCTCATTCAACAATCCATTTGCCATGACAGAAATAGGAGATGGACCATTTCAGTGTCATGGGGTTTTGCTGTTCAGATATTTCGCGGCATATTTACACAGCGGGAGATGGAAATGCCTTCAAGAACATTCCTCAATTGGTATAGAAGAGCAGATTACACTGCATATGCCTTCAACACACGCCCGTTTAGCAGAAACCCGTGTCAGAAACCTTTCGTCTTTTACTTTTCCAAGGCAAAACTCAATTCCACTTTGCAACAAACAGTGACTGAATATGAAAGAGATCCTATTCCTCCTCCAGAATGTCGATGGAATATGGCTGATCCTTCTGCTCTTGACAAAATAGAGGTGCACAAGAAGCAGGACCCGCATCTATGGGATAGAGCCCCAAGGAGAAACTGTTGCAGAGTGATGAAGTCGAACAAGACAGGAATCTTGAAGATAGAAGTGGCTGTATGTAGAGATGGTGAGTTCAGTGAACCTGCTTAA 1527 0.4964 MKDSDKLTWDQGRCLSPAQARSSASQKLMVSLMFLVSLTYMAYTLKLVSTSTSSSTCSHAPFIINHLFPSSNVTEWPSSSQTSRTGKGKRPGRQKTELRHLVFGIAASSKLWEHRKNYIKTWYKKDKMRGVVWLDDRVKTNPKEGLPPTKVSTDTSNFVYTNKLGHRSAIRISRIVTETLRMGHKDVRWFVMGDDDTVFVTDNLLRILNKYDHNYMYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALSKMQDRCIQRYPALYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNATRVEAIKRLTIPMKLDSASLIQQSICHDRNRRWTISVSWGFAVQIFRGIFTQREMEMPSRTFLNWYRRADYTAYAFNTRPFSRNPCQKPFVFYFSKAKLNSTLQQTVTEYERDPIPPPECRWNMADPSALDKIEVHKKQDPHLWDRAPRRNCCRVMKSNKTGILKIEVAVCRDGEFSEPA 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00201 508 PANTHER FRINGE-RELATED 7 506 - -
Gma11g00201 508 Gene3D - 88 346 - -
Gma11g00201 508 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 7 506 - -
Gma11g00201 508 MobiDBLite consensus disorder prediction 74 94 - -
Gma11g00201 508 Pfam Protein of unknown function, DUF604 228 481 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00201 Gma-Chr11 1584820 1588861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00201 4 502 Glycosyltransferase AT5G41460 65.049 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00201 - - gmx:100801504 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00201 11 1584820 1588861 Gma11g00201 11 1584820 1588861 ECH
Gma01g02216 01 57388980 57394367 Gma11g00201 11 1584820 1588861 GST
Gma11g00201 11 1584820 1588861 Gma05g02060 05 41856208 41860256 PCT
Gma11g00201 11 1584820 1588861 Gma08g00163 08 1403303 1406553 PCT