Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02216 ATGAAAGGTTCGGAGAAAGTAATGTGGGATCAGGGTCGATGTGCACGATCCTCGGCCTCCCAGAAGCTTATGGTATGGCTCATGTTCCTGGTTTCACTCACCTACATGGCTTACACTCTCAAGCTGGTATCCACGTCCACGTCATCAAGCACGTGCAACCACGCGCCTTTCATCATCAACCACCTCTCCTCCACAACCTCTTTCTCTTCCTCAAATGGAACGGAGTGGCCGGAAGCGGAATCTTCATCTTCATCCCACAATTCCCGTGCCGGAAAGGGGAAACGGGGGCAGAAAACGGAGCTCCGGCACCTGGTGTTCGGAATCGCGGCGTCGTCGAAGCTATGGGAACACAGAAAGAACTACATAAAGATTTGGTACAAGAAGGAGAAGATGAGGGGAGTGGTGTGGCTGGACGATCGCGTGAAGAGGAACCCCAGCGAAGGGTTGCCACCAACCAAGGTTTCCACCGACACTTCCAATTTCGTATACACCAACAAGCTGGGCCACCGCTCCGCGATTCGAATATCGCGCATCGTGACGGAAACGCTGCGTATGGGGCACAAGGACGTGCGGTGGTTCGTGATGGGCGACGACGACACCGTTTTCGTGACGGACAATCTGCTGAGGATTTTAAACAAGTACGACCACAACTACATGTACTACATTGGGAGCTTGTCGGAGAGTCACTTGCAGAACATATTCTTCTCCTACGGCATGGCCTATGGTGGGGGCGGTTTCGCCATAAGCTACCCTTTGGCCAAAGCTCTGAGCAAAATGCAGGACCGTTGTATTCAGCGCTATCCTGCTCTCTATGGCTCCGATGATCGAATGCAAGCTTGCATGGCTGAACTCGGTGTTCCACTCACTAAGGAAATCGGTTTTCACCAGTATGATGTGTATGGGAACTTGTTTGGGCTTCTTGCAGCTCATCCAGTGACTCCATTGGTGTCACTGCACCACCTTGATGTGGTTGAGCCAATCTTCCCAAATGCCACTAGAGTAGAAGCCATTAAACGGCTAACCATTCCAATGAAGCTTGACTCGGCATCTCTCATTCAACAATCCATTTGCCATGACAGAAATAGGAGATGGACCATTTCAGTGTCATGGGGTTTTGCTGTTCAGATATTTCGCGGGATATTTACACAGCGGGAGATGGAAATGCCTTCAAGAACATTTCTCAATTGGTATAGAAGAGCAGATTACACTGCATATGCCTTCAACACACGCCCGTTTAGCAGAAACCCGTGTCAGAAACCTTTCGTGTTTTACTTTTCAAAGGCAAAACTCAATTCTACCTTGCAACAAACAGTGACTGATTATGAAAGAGATCCGATTCCTTCTCCAGAATGTCGATGGAATATGGCTGATCCTTCTGCTCTTGACAAAATAGAGGTGCATAAGAAGAAAGACCCGCATCTATGGGATAGAGCCCCAAGGAGAAACTGTTGTAGAGTGATGAAATCGAACAAGACAGGAATCTTGAAGATAGAAGTGGCTGTATGTAGAGATGGTGAGTTCAGTGAACCTGCTTAA 1536 0.487 MKGSEKVMWDQGRCARSSASQKLMVWLMFLVSLTYMAYTLKLVSTSTSSSTCNHAPFIINHLSSTTSFSSSNGTEWPEAESSSSSHNSRAGKGKRGQKTELRHLVFGIAASSKLWEHRKNYIKIWYKKEKMRGVVWLDDRVKRNPSEGLPPTKVSTDTSNFVYTNKLGHRSAIRISRIVTETLRMGHKDVRWFVMGDDDTVFVTDNLLRILNKYDHNYMYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALSKMQDRCIQRYPALYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNATRVEAIKRLTIPMKLDSASLIQQSICHDRNRRWTISVSWGFAVQIFRGIFTQREMEMPSRTFLNWYRRADYTAYAFNTRPFSRNPCQKPFVFYFSKAKLNSTLQQTVTDYERDPIPSPECRWNMADPSALDKIEVHKKKDPHLWDRAPRRNCCRVMKSNKTGILKIEVAVCRDGEFSEPA 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02216 511 MobiDBLite consensus disorder prediction 73 96 - -
Gma01g02216 511 Pfam Protein of unknown function, DUF604 231 484 IPR006740 -
Gma01g02216 511 PANTHER FRINGE-RELATED 10 509 - -
Gma01g02216 511 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 10 509 - -
Gma01g02216 511 Gene3D - 92 349 - -
Gma01g02216 511 MobiDBLite consensus disorder prediction 73 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02216 Gma-Chr1 57388980 57394367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02216 1 509 Glycosyltransferase AT4G23490 63.501 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02216 - - gmx:100801444 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02216 01 57388980 57394367 Gma01g02216 01 57388980 57394367 ECH
Gma01g02216 01 57388980 57394367 Gma11g00201 11 1584820 1588861 GST
Gma01g02216 01 57388980 57394367 Gma05g02060 05 41856208 41860256 PCT
Gma01g02216 01 57388980 57394367 Gma08g00163 08 1403303 1406553 PCT