Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00163 ATGGGTGAGAAAGAGTCAGAGAAGCTGCTATTTTGGGAACATATGAGAACTCCCATTGCACCACAGCACCCAACATTACCAAAACTTCTTGTCCTTCTCATCCTCTTCGTCTCCCTCACCTACCTCGTCTACACGCTCAAGCTTGTCTCCACCTCACGCGCCTGCAAAGACGCCCCATTCTCCAAAACCATCATCGCCGTCAATGCCACCGCCTCCGCCGCCGCAGTTCTCCGACGAGGCTCCCGCGAGACTAATCCCGAGGACCGGACGGACCTCCGCCATTTGGTGTTCGGAATCGCGGCGTCGGCCAAGCTATGGGACCAGAGGAAGAGCTACATCAAGCTCTGGTACAGAGCGAGGGACATGCGCGGCGTGGTGTGGCTCGACGAGAAGGTGAAATCGGAGGAAAACAACAGCGACACGCTCCCGCCGGTGAGAATCTCCGGCGACACGGCGAGGTTCAAGTACACGAACAGGCAAGGGCACCGGTCTGCGATTAGGATCTCGCGGATCGTGTCGGAGACGCTGCGGCTGGGGATGAAGGACGTGCGGTGGTTCGTGATGGGAGACGACGACACCGTTTTCGTCACCGAAAACCTAATTCGCGTTTTGAGAAAATACGATCACAATGAGTTGTATTACATAGGGAGCTTGTCGGAGAGTCACTTGCAGAACATTTTCTTCTCTTACAACATGGCCTATGGCGGAGGAGGTTTTGCAATTAGTTATCCTCTGGCGAAGGCTCTTCAGAAAATGCAGGACCGTTGCATTCAGCGTTACCCGGCTCTCTATGGTTCTGATGATAGAATGCAAGCGTGTATGGCCGAACTCGGTGTTCCACTCACCAAGGAAATCGGTTTTCACCAGTATGATGTGTATGGAAACCTGTTCGGCCTTCTTGCGTCTCATCCCGTGACTCCATTGGTGTCACTGCACCACCTCGATGTGGTTGAGCCTATCTTCCCCAACGTGACTCAAGTAGAAGCCCTTCAACGGCTCACTATACCAATGAAGCTTGACTCAGCAGGACTCATGCAGCAATCCATATGCTACGACAAATCAAAGAGCTGGACCGTTTCTGTTTCGTGGGGTTTTGCTGTTGAGATATTTCGCGGCGTGTTTTCACCACGTGAGATGGAAATGCCTTCAAGAACATTCTTGAATTGGTATAGAAGAGCTGATTACACTGCATATGCATTCAACACACGTCCAGTTAGCCGAAATCCATGCCAGAAGCCTTTTGTGTTTTACTTCTCAAAGGCTAAATACAATTCTACAATGCAACAAATAGTGAGTGAATATGAAAGGCACCGCGTCCCTCATCCTGATTGCAGGTGGAAGATGGCTAATCCTGCTGCTTTTGACAAAGTGGAGGTATACAAGAAGCCAGATCCGCATCTATGGGACAGAGCTCCGAGGAGAAACTGTTGCAGAGTGAGGAAGTCAAAGGAGAAAGGGACCATGGTGATAGATGTGGATATGTGTAGGGATGGTGAGGTAAGCGAAACATAA 1512 0.5079 MGEKESEKLLFWEHMRTPIAPQHPTLPKLLVLLILFVSLTYLVYTLKLVSTSRACKDAPFSKTIIAVNATASAAAVLRRGSRETNPEDRTDLRHLVFGIAASAKLWDQRKSYIKLWYRARDMRGVVWLDEKVKSEENNSDTLPPVRISGDTARFKYTNRQGHRSAIRISRIVSETLRLGMKDVRWFVMGDDDTVFVTENLIRVLRKYDHNELYYIGSLSESHLQNIFFSYNMAYGGGGFAISYPLAKALQKMQDRCIQRYPALYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLASHPVTPLVSLHHLDVVEPIFPNVTQVEALQRLTIPMKLDSAGLMQQSICYDKSKSWTVSVSWGFAVEIFRGVFSPREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYFSKAKYNSTMQQIVSEYERHRVPHPDCRWKMANPAAFDKVEVYKKPDPHLWDRAPRRNCCRVRKSKEKGTMVIDVDMCRDGEVSET 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00163 503 Gene3D - 82 340 - -
Gma08g00163 503 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 17 502 - -
Gma08g00163 503 Pfam Protein of unknown function, DUF604 224 477 IPR006740 -
Gma08g00163 503 PANTHER FRINGE-RELATED 17 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00163 Gma-Chr8 1403303 1406553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00163 27 502 Glycosyltransferase AT4G23490 71.079 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00163 - - gmx:100795943 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00163 08 1403303 1406553 Gma08g00163 08 1403303 1406553 ECH
Gma05g02060 05 41856208 41860256 Gma08g00163 08 1403303 1406553 GST
Gma01g02216 01 57388980 57394367 Gma08g00163 08 1403303 1406553 PCT
Gma11g00201 11 1584820 1588861 Gma08g00163 08 1403303 1406553 PCT