Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02060 ATGGGTGAGAAAGACTCAGAGAACCTCATTTGGGAACAGATGAGAACCCCGACAGCTGCCACTCCCATTGCTGCACCCCAACAGCACCGCACATTACCAAGGCTTCTTGTCCTTCTCATCCTCTTCGTCTCCGTCACCTACGTCGTCTACACGCTCAAGCTCGTCTCCACCTCACGCGCCTGCAACAACGACGCCCCATTCTCCACCGACAACTTCTCCAAAACCATCCTCTCCGTCAATGCCACCGCCGCAGTTCTCCGCCGAGGCTCCCTCGAGACGAATCCCGAGGACCGGACGGACCTCCGCCACGTGGTGTTCGGAATCGCGGCGTCGGCGAAGCTTTGGGAGCAGAGGAGGAGCTACATCAAGCTCTGGTACAGGGCGAGGGACATGCGCGGCGTGGTGTGGCTCGACGAGGAGGTGAAATCGGAGGAGAGCAGCGACGCACTCCCGCCGGTGAGAATCTCCGGTGACACGGCGAGGTTCAAGTACACGAACAGGCAGGGGCACCGGTCTGCGATTAGGATCTCGCGGATCGTGTCGGAGACGCTGCGGTTGGGGATGAAGGACGTGCGGTGGTTCGTGATGGGCGACGACGACACCGTTTTTGTCACCGAAAACCTAATTCGGGTTTTGAGAAAATATGATCACAATCAGTTCTATTACATTGGGAGTTTGTCTGAGAGTCACTTGCAGAACATTTTCTTCTCTTATAACATGGCCTATGGCGGAGGAGGTTTTGCAATTAGTTATCCTCTCGCCAAGGCTCTTCAGAAAATGCAGGACCGTTGCATTCAGCGTTACCCGGGTCTCTATGGTTCCGATGATAGAATGCAAGCGTGTATGGCCGAACTCGGTGTTCCACTCACCAAGGAAACCGGTTTTCACCAGTATGATGTATATGGAAACCTGTTCGGGCTTCTTGCGTCTCATCCCGTGACTCCATTGGTGTCACTGCACCACCTTGATGTGGTTGAGCCTATCTTTCCTAACGTTACCCGAGTTGAAGCCCTTCAACGGCTCACTATACCAATGAAGTTTGACTCTGCAGGACTCATGCAGCAATCCATCTGCTACGACAAATCAAAGAGTTGGACTGTTTCCGTTTCATGGGGTTTTGCTGTTCAGATATTTCGCGGCGTGTTTTCACCACGTGAGATGGAAATGCCTTCAAGAACATTCTTGAATTGGTATAGAAGAGCAGATTACACTGCATATGCATTCAACACACGTCCTGTTAGCCGAAATCCATGCCAGAAGCCTTTTGTGTTTTACTTCTCAAAGGCAAAATACAATTCTACAATGCAACAAATAGTGAGTGAATATGAAAGGCACCGCGTCCCTCATCCTGATTGCAAGTGGAATATGGCTAATCCTGCAGCTCTTAACAAAGTGGAGGTATACAAGAAGCCAGATCCTCATCTATGGGATAGAGCTCCAAGGAGAAACTGTTGCAGAGTGAGGAAGTCAAAGGAGAAAAGGACCATGGTGATAGATGTGGGTGTGTGCAGGGAAGGTGAGGTAAGCGAAACATAA 1536 0.5111 MGEKDSENLIWEQMRTPTAATPIAAPQQHRTLPRLLVLLILFVSVTYVVYTLKLVSTSRACNNDAPFSTDNFSKTILSVNATAAVLRRGSLETNPEDRTDLRHVVFGIAASAKLWEQRRSYIKLWYRARDMRGVVWLDEEVKSEESSDALPPVRISGDTARFKYTNRQGHRSAIRISRIVSETLRLGMKDVRWFVMGDDDTVFVTENLIRVLRKYDHNQFYYIGSLSESHLQNIFFSYNMAYGGGGFAISYPLAKALQKMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKETGFHQYDVYGNLFGLLASHPVTPLVSLHHLDVVEPIFPNVTRVEALQRLTIPMKFDSAGLMQQSICYDKSKSWTVSVSWGFAVQIFRGVFSPREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYFSKAKYNSTMQQIVSEYERHRVPHPDCKWNMANPAALNKVEVYKKPDPHLWDRAPRRNCCRVRKSKEKRTMVIDVGVCREGEVSET 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02060 511 Gene3D - 92 358 - -
Gma05g02060 511 PANTHER FRINGE-RELATED 24 510 - -
Gma05g02060 511 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 24 510 - -
Gma05g02060 511 Pfam Protein of unknown function, DUF604 232 485 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02060 Gma-Chr5 41856208 41860256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02060 3 510 Glycosyltransferase AT4G23490 69.157 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02060 - - gmx:100818244 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02060 05 41856208 41860256 Gma05g02060 05 41856208 41860256 ECH
Gma05g02060 05 41856208 41860256 Gma08g00163 08 1403303 1406553 GST
Gma01g02216 01 57388980 57394367 Gma05g02060 05 41856208 41860256 PCT
Gma11g00201 11 1584820 1588861 Gma05g02060 05 41856208 41860256 PCT