Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00156 ATGAAGAGTCTCGTAGCTGTGCTTTTAGTTATAGTATTAAGCACTGCTCTGGAAAGCAATGGAGAAGATGATCATGAACGATGTAAACAGGAAGCAGTGGATCCTAGGCCTCACAGCGTGTCAATCTTAGAGTTCGGAGCAGTTGGAGACGGGAAAACGCTGAACACAGTTGCATTCCAAAATGCAGTTTTTTATGCCAAGTCATTTGCTGACAAAGGTGGGGCTAAACTATATGTTCCATCTGGCAAGTGGCTTACTGGAAGTTTTAACCTTACCAGCCACCTCACTCTCTTCCTTGAGCGAGGCGCAACCATCATTGCATCACAGGATTATGCACACTGGACTGCAATGGACCCCCTACCCTCCTATGGTCGAGGAATTGATGTTCCTAGTGGGAGATATCGCAGTTTAATTTATGGACagaacttaaGTGATAATGCAATTATTGATGGGCAGGGTTCTGTCTGGTGGGACCTAATCGGTACTCATTCCTTAAATTACAGCAGACCACATATTATAGAACTTGTTGGTTCTGATAATATCACAATCTCAAATTTGACATTTTTAAACTCTCCTGCCTGGAGCATCCATCCAGTATATTGCAGTAACGTTCAAATCCAGAAGATAACAGTTCATGCACCAACTGAGTTCCCTTACACAAGCGGTATAGTTCCAGATTCTTCTGAGCATGTTTGCATTTACAACAGCAATATTAGCACTGGTCATGATGCAATTGTGCTGAAGAGTGGTTGGGATCAATATGGAGTTGCCTATGGCAAACCAACCTCAAAGGTCCACATCCGGGGTGTTTATCTACAATCTTCATCTGGCGCTGGCCTAGCATTTGGGAGTGAGATGTCTGGAGGCATATCTGATATAATTGCAGAGCAGCTCCATATTACCAACTCAACTATTGGCATTGAACTGAAGACAACTAGGGGTAGAGGTGGTTATATGAAAAACATCTTCATTTCTGACGCAAAATTGGAAAATATTTACTTGGGTATCAGCATGACGGGAAGCTCTGGCTCCCATCCAGATGACAAGTACGATCCTAATGCAGTTCCGGATGTTGGTAATGTTACTTTTGAGAATGTGATTGGTACAAATATTGCTATTGCTGGGAATTTTTCAGGAATAGTTGATTCGCCTTTCACTCCTATCTGTCTTTTGAACGCGACCTTTTCTTCCAGTTCTGAGTCATCATCTCCTTCATGGTTTTGTTCTGACATAATGGGAATCTCCGAGGAAGTGTTTCCTGAGCCATGTCCTGATCTGCAGAACACGTATTCAAACTTTTCCTCTTGCTTTTCTTCCCTACATCCGTCGTCTAGTTATGTCTCAAGCGCATGA 1353 0.4265 MKSLVAVLLVIVLSTALESNGEDDHERCKQEAVDPRPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSFNLTSHLTLFLERGATIIASQDYAHWTAMDPLPSYGRGIDVPSGRYRSLIYGQNLSDNAIIDGQGSVWWDLIGTHSLNYSRPHIIELVGSDNITISNLTFLNSPAWSIHPVYCSNVQIQKITVHAPTEFPYTSGIVPDSSEHVCIYNSNISTGHDAIVLKSGWDQYGVAYGKPTSKVHIRGVYLQSSSGAGLAFGSEMSGGISDIIAEQLHITNSTIGIELKTTRGRGGYMKNIFISDAKLENIYLGISMTGSSGSHPDDKYDPNAVPDVGNVTFENVIGTNIAIAGNFSGIVDSPFTPICLLNATFSSSSESSSPSWFCSDIMGISEEVFPEPCPDLQNTYSNFSSCFSSLHPSSSYVSSA 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00156 450 Pfam Glycosyl hydrolases family 28 143 370 IPR000743 GO:0004650|GO:0005975
Gma10g00156 450 PANTHER POLYGALACTURONASE-RELATED 5 442 - -
Gma10g00156 450 PANTHER PECTIN LYASE-RELATED 5 442 - -
Gma10g00156 450 SUPERFAMILY Pectin lyase-like 34 433 IPR011050 -
Gma10g00156 450 Gene3D - 19 411 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00156 Gma-Chr10 1470137 1473466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00156 1 438 Glycoside Hydrolase AT3G16850 57.528 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00156 - - gmx:100818007 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00156 10 1470137 1473466 Gma10g00156 10 1470137 1473466 ECH
Gma10g00156 10 1470137 1473466 Gma02g00150 02 1432457 1435994 GST
Gma19g02028 19 49230155 49233294 Gma10g00156 10 1470137 1473466 PCT
Gma03g01995 03 45592245 45595841 Gma10g00156 10 1470137 1473466 PCT
Gma10g00156 10 1470137 1473466 Gma19g02028 19 49230155 49233294 PCT
Gma10g00156 10 1470137 1473466 Gma03g01995 03 45592245 45595841 PCT