Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00150 ATGAAGTGCGGAGCTGGCATTTTCCTTTATAGCCGTCGCTTTCTACTACCTCCCCCCGTTTGTTTTTATTGTTTCCAGTACTTGCTTGGCATTATATACGAAATAGCTCTTGCTCTCTTCCTCTTGTGCTGTCCTTATGTTCTTCTTCTAGTTCTTCTACCCTCTTCTTCACTCTTGTTCCATCACTGCTTTCAGAGCTTCCTATTTCTCTTTGAAGAAGAGGGGCACAGACCCATGAAGAGGCTCGTAACTGTGCTTTTACTCATAATATTAAGCACTGCTCTGGAAGGCAATGGAGAAGATGATCATGAACCGTGTAAAGAAAAAGTGTTGGATCCTAGGCCTCACAGCGTGTCAATCTTAGAGTTTGGGGCAGTTGGAGATGGAAAAACACTGAACACAGTTGCATTCCAAAATGCAGTTTTTTATGCCAAGTCATTTGCTGACAAAGGTGGGGCTAAACTATATGTTCCATCTGGCAAGTGGCTCACTGGAAGTTTTAACCTTACCAGCCACCTCACTCTCTTTCTTGAAAGAGGCGCAACCATCATCGCATCACAGGATTATGCACACTGGACTGCAATGGATCCCCTACCCTCCTATGGTCGAGGTATTGATGTTCCTGTTGGGAGATACCGCAGTTTGATTTATGGACAGAACTTAAGTGATGATGAACATTGCTGTGCTACCATACTCAAATTGATGTATTTAATAAATGCAACAGGTGATAATGGAATTATTGATGGGCAGGGTTCTGTTTGGTGGGACCTAATCAGTACTCATTCCTTAAATTATAGCCGACCACATATTATAGAACTTGTTGGTTCTGATAATATCATAATCTCAAATTTGACATTTTTAAACTCTCCTGCTTGGAGCATCCATCCCGTATATTGCAGTAACATTCAAATCCAGAAGATAACAGTTCAGGCACCAACCAAGTTCCCTTACACAAGCGGTATAGTTCCAGATTCTTCTGAGCATGTTTGCATTGACAACTGCAATATTAGCACTGGTCATGATGCAATTGTGCTGAAGAGTGGTTGGGATGAATATGGAGTTGCCTATGGCAAACCAACCTCAAACGTCCACATCAGGGGTGTTTATCTACAATCGTCATCTGGTGCTGGCCTAGCGTTTGGAAGTGAGATGTCTGGAGGCATATCTGATATAATTGCAGAGCAGCTCCATATTACCAACTCAACTTTTGGCATTGAACTGAAGACAACTAGGGGTAGAGGTGGCTACATGAAAAACATTTTCATTTCTGACGCAAAATTGGAAAATATTTACTTGGGTATCAGCATGACGGGAAGTTCTGGCTCCCATCCAGATGACAAGTATGATCCTAATGCAGTTCCGGATGTTGGTAATGTTACTTTTGAGAATGTGATTGGTGCAAATATTGCTATTGCTGGGAATTTTTCAGGAATAGTTGATTCGCCTTTCACTCCTATCTGTCTTTCAAACGTGACTTTTTCTACCAGTTCCGAGTCATCTCCTTCATGGTTTTGTTCTAACGTAATGGGAATCTCCAAGGAGGTGTTTCCTGAGCCATGTCCTGATCTGCAGAACACGTATTCAAACTTTTCCTCTTGCTTTTCTTCCCTACATCCGTCATCTAGTTTTGTCTCAAGCGCATGA 1644 0.4209 MKCGAGIFLYSRRFLLPPPVCFYCFQYLLGIIYEIALALFLLCCPYVLLLVLLPSSSLLFHHCFQSFLFLFEEEGHRPMKRLVTVLLLIILSTALEGNGEDDHEPCKEKVLDPRPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSFNLTSHLTLFLERGATIIASQDYAHWTAMDPLPSYGRGIDVPVGRYRSLIYGQNLSDDEHCCATILKLMYLINATGDNGIIDGQGSVWWDLISTHSLNYSRPHIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSGIVPDSSEHVCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSEMSGGISDIIAEQLHITNSTFGIELKTTRGRGGYMKNIFISDAKLENIYLGISMTGSSGSHPDDKYDPNAVPDVGNVTFENVIGANIAIAGNFSGIVDSPFTPICLSNVTFSTSSESSPSWFCSNVMGISKEVFPEPCPDLQNTYSNFSSCFSSLHPSSSFVSSA 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00150 547 Pfam Glycosyl hydrolases family 28 240 509 IPR000743 GO:0004650|GO:0005975
Gma02g00150 547 SUPERFAMILY Pectin lyase-like 110 529 IPR011050 -
Gma02g00150 547 PANTHER POLYGALACTURONASE-RELATED 83 539 - -
Gma02g00150 547 Gene3D - 103 514 IPR012334 -
Gma02g00150 547 SMART pbh1 388 409 IPR006626 -
Gma02g00150 547 SMART pbh1 276 301 IPR006626 -
Gma02g00150 547 SMART pbh1 360 382 IPR006626 -
Gma02g00150 547 SMART pbh1 326 347 IPR006626 -
Gma02g00150 547 SMART pbh1 417 438 IPR006626 -
Gma02g00150 547 PANTHER PECTIN LYASE-RELATED 83 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00150 Gma-Chr2 1432457 1435994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00150 81 535 Glycoside Hydrolase AT3G16850 56.798 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00150 - - gmx:100801823 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00150 02 1432457 1435994 Gma02g00150 02 1432457 1435994 ECH
Gma10g00156 10 1470137 1473466 Gma02g00150 02 1432457 1435994 GST
Gma19g02028 19 49230155 49233294 Gma02g00150 02 1432457 1435994 PCT
Gma03g01995 03 45592245 45595841 Gma02g00150 02 1432457 1435994 PCT
Gma02g00150 02 1432457 1435994 Gma19g02028 19 49230155 49233294 PCT
Gma02g00150 02 1432457 1435994 Gma03g01995 03 45592245 45595841 PCT