Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00536 ATGCCTCCGGCGCTGTCGGATCCGCTGTCGGTGACTCCGGCAAGCTCCGACGCTGTTCTGCAGCGATCGGCGCCGCCGGAGAATCGGCGATTCGGTGATCTTAGAGGGTTGCAGTGGCGGATAAATCTTGGGGTGCTGCCGTCTTCGTCTTCGACTTCAATTGATGATCTTCGTCGAGTCACCGCGAATTGTAGAAGAAGGTATGCTAGCTTGAGAAGGCGCCTTCTGGTTGAACCACATGTTCCAAAGGATGGAGCTAATTCACGCAATCTTGTCATTGACAATCCACTTTCACAGAATCCAGATAGTACATGGGGTCGCTTTTTCCGCAATGCAGAGTTGGAGAGAATGGTTGATCAGGATTTATCACGTTTATACCCAGAACATGGCAGTTATTTTCAGACTCCAGGATGCCAAAGCATGTTGAGACGAATTTTATTACTGTGGTGTCTCAGGCACCCAGAATGTGGTTATAGACAAGGAATGCATGAATTACTTGCTCCTCTGCTTTATGTTCTCCAAGTTGATTTGGAGCATCTTTCGGAAGTTCGGAAGCTTTACGAAGATCACTTTACAGACAGATTTGACGGCCTTTTATATCAAGAGAATGATCTTTCTTACAGCTTTGATTTTAAAAAATCTCCAGAATTGATGGAGGATGAATTTGGTTCTCATGGAAATGCTGTGAAAGTCAATAGTCTTGAGGAACTTGATCCTGAGATACAGACCATTGTATTACTAAGTGATGCTTATGGAGCTGAAGGTGAACTGGGCATTGTTTTATCTGAGAAATTCGTGGAGCATGACGCATACTGTATGTTTGATGCTTTGATGAGTGGGGCCCATGGTTCAGTTGCAATGGCCGATTTCTTCTCTTCATCCCCTGTATCTGGGTCCCATAGTGGCGTGCCTCCTGTGATTGAGGCTTCGGCTGCATTGTATTATTTGTTGTCTCTTGTAGATTCATCTCTCCACAGCCATCTTTTTGAACTTGGGGTTGAACCTCAGTACTTTTCTCTTCGATGGTTGCGAGTTTTATTTGGACGAGAATTTTCACTTGCCAACCTCTTGATCATATGGGATGAGATCTTTGCATCAGAGAATAGCAGCTTGGAAAAAGGTGCTGATGACTGTGAGTTCAGGATCTTAAGTTCACCTCGTGGAGCATTTATCTCAGCTATGGCAGTAGCTATGTTACTTCATTTAAGATCTTCACTACTTGCAACTGAAAACCCTACAAGGTGTCTTCAGAGATTACTAAACTTTCCTGAAGACATTAATATTGAAAAACTACTAGAGAAGGCTAAATCCTTGCAGGCTTTGGCACTGAGTGTTGATATTTCATCATCGTCACTTTTGTTTCTTGGATTTCATTACCAAAGTAAATCTATATATACTACATCTGTGACCCTTCCATCTGAATCCGTGTCTCCGAAAACTCCACTGAATTTGTTACCCGATAGCTATTGGGAAGAGAAGTGGAGGGTTGCCCACAAGGCTGAAGAACTTAGGCAAGATAGTCTAGAAAAGCAGGTTCCCACTCGGAAAAAGGGATGGACGGAAAAGGTAAAATTCAGTTTGAGACGAGCAAAATCTGACCCTCCTTTGTCAAGGATTCAGAGTGGCAAACATTTTAGGCGCAGTTTGTTGGAAGATCTTCGCAAGGCACTCGGCTCAGAGGAAGATGCAGAGAAAATGCAGCCAGATGAAACACTACGGCAGCATGATAATCCTTCTGAAGCAGTTGAAGTACAACAAGAAGATAGTGTCTGTAGTGGTGACAGCAATTACTTGTCTGATGATAGATCTCCAAGTGGAAATTCTGGCAGTGAGGAAGACTTGTCTATATATTCTGACCCGACTAGTCCCCAGAATGAGGTCAATGATCATGAAATTACCTCAGCGAAAAGTAGTGTTACATCTAATTCATCCCTAGACGAATGCAATGAAACTTCAGGTACCAGTTCACCATTTCCaatctccgatcctcctgagaacatttctcagacatcacagtgcaatacagaaaattatgaatgcagtgaaacatcacataccagtcccaatgatccacaccttctaatctccgatcttcccgagaacatttctcagacatcacagtgcaatacagaaaattctgaatgcaatgaaacttcacataccagtcccaatgatccaccccttctaatctccaatcctcccaagaacatttctcagacatcacagtgcaatacagaaaattctgaatgcaatgaaacttcagttatctgtcccaatgatccactccttccaatctctgatcctccAAAGAACAAACCTCCGACATCAGGGTGCAATAGCTTTGAGGAAGCAGGAAATACAGTCAATCCTCCTAAAGACAAAAAACAGAATAAGTTGCAGTGGTTTTGGCCGTTTGGACGGAATAATGTTGAAGTGATCTCCGAGAAAGCAGCAGGTGCTGCTGAAGCCGCCAACCGGGGTAGCATTCAAAAAAATACTCCACAACCAGCCTCATCTGCAGTTAATGAGCCTTGTAGTTCTGTTAGTTGCAGTGGAGAATCTGTTGACAAGAATGTGATGGGCACTTTGAAGAATATTGGACAGTCTATGCTTGACCATATTCAGATAATTGAATCTGTTTTCCAACAAGACCGCAAAGGCCAAGTTACTGCCATGACTGCTCTCAAAGAGCTTAGGAAAATTAGCAATCTTTTGTCTGAGATGTGA 2727 0.3814 MPPALSDPLSVTPASSDAVLQRSAPPENRRFGDLRGLQWRINLGVLPSSSSTSIDDLRRVTANCRRRYASLRRRLLVEPHVPKDGANSRNLVIDNPLSQNPDSTWGRFFRNAELERMVDQDLSRLYPEHGSYFQTPGCQSMLRRILLLWCLRHPECGYRQGMHELLAPLLYVLQVDLEHLSEVRKLYEDHFTDRFDGLLYQENDLSYSFDFKKSPELMEDEFGSHGNAVKVNSLEELDPEIQTIVLLSDAYGAEGELGIVLSEKFVEHDAYCMFDALMSGAHGSVAMADFFSSSPVSGSHSGVPPVIEASAALYYLLSLVDSSLHSHLFELGVEPQYFSLRWLRVLFGREFSLANLLIIWDEIFASENSSLEKGADDCEFRILSSPRGAFISAMAVAMLLHLRSSLLATENPTRCLQRLLNFPEDINIEKLLEKAKSLQALALSVDISSSSLLFLGFHYQSKSIYTTSVTLPSESVSPKTPLNLLPDSYWEEKWRVAHKAEELRQDSLEKQVPTRKKGWTEKVKFSLRRAKSDPPLSRIQSGKHFRRSLLEDLRKALGSEEDAEKMQPDETLRQHDNPSEAVEVQQEDSVCSGDSNYLSDDRSPSGNSGSEEDLSIYSDPTSPQNEVNDHEITSAKSSVTSNSSLDECNETSGTSSPFPISDPPENISQTSQCNTENYECSETSHTSPNDPHLLISDLPENISQTSQCNTENSECNETSHTSPNDPPLLISNPPKNISQTSQCNTENSECNETSVICPNDPLLPISDPPKNKPPTSGCNSFEEAGNTVNPPKDKKQNKLQWFWPFGRNNVEVISEKAAGAAEAANRGSIQKNTPQPASSAVNEPCSSVSCSGESVDKNVMGTLKNIGQSMLDHIQIIESVFQQDRKGQVTAMTALKELRKISNLLSEM 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00536 908 MobiDBLite consensus disorder prediction 559 745 - -
Gma09g00536 908 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 102 284 - -
Gma09g00536 908 Gene3D - 306 445 - -
Gma09g00536 908 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 763 843 - -
Gma09g00536 908 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 18 558 - -
Gma09g00536 908 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 33 327 IPR035969 -
Gma09g00536 908 MobiDBLite consensus disorder prediction 824 845 - -
Gma09g00536 908 MobiDBLite consensus disorder prediction 559 582 - -
Gma09g00536 908 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 304 439 IPR035969 -
Gma09g00536 908 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 18 558 - -
Gma09g00536 908 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 763 843 - -
Gma09g00536 908 MobiDBLite consensus disorder prediction 698 745 - -
Gma09g00536 908 SMART tbc_4 26 410 IPR000195 -
Gma09g00536 908 Pfam Rab-GTPase-TBC domain 115 174 IPR000195 -
Gma09g00536 908 Pfam Rab-GTPase-TBC domain 266 368 IPR000195 -
Gma09g00536 908 ProSiteProfiles TBC/rab GAP domain profile. 29 367 IPR000195 -
Gma09g00536 908 MobiDBLite consensus disorder prediction 772 794 - -
Gma09g00536 908 MobiDBLite consensus disorder prediction 583 691 - -
Gma09g00536 908 MobiDBLite consensus disorder prediction 826 845 - -
Gma09g00536 908 MobiDBLite consensus disorder prediction 1 27 - -
Gma09g00536 908 MobiDBLite consensus disorder prediction 761 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00536 Gma-Chr9 5606345 5611316 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00536 K18469 - gmx:100782008 1781.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00536 09 5606345 5611316 Gma09g00536 09 5606345 5611316 ECH
Gma15g01541 15 14545576 14552041 Gma09g00536 09 5606345 5611316 GST
Gma17g00561 17 4613750 4621153 Gma09g00536 09 5606345 5611316 PCT
Gma13g00804 13 22349619 22357430 Gma09g00536 09 5606345 5611316 PCT
Gma09g00536 09 5606345 5611316 Gma17g00561 17 4613750 4621153 PCT
Gma09g00536 09 5606345 5611316 Gma13g00804 13 22349619 22357430 PCT