Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01355 ATGCTGGGCTATGATGATGACGATATCGATGTGTTCTTTGACTCAGTGGATAGTTTGTCAGCTCAAGATTCTGTTTTAGGCAAAGAAGGGTTTGATTCTGAAAGGTGTGGTTATGACGAAATTTGGGTGAAGGAGCCTGTTAGTGTGAAGGAGAGGAGGGAACGTTTTCTGCAGGGTTTGGGTTTAGCTGATGCTGCTTCCAAGGTTTGTTCACAAGAGAAAATGAGCTTTGATGATTCGTCCATCAGCTTGGGATTGGAGAGGATCAGGGAGTGCAGTGGGGCAATCTCAAATGCTTGCATTTTGCATACTGATCCAGTAGTATCTGAGAAGTTGATTCTCTCAGGAGGCAAAGCAGCTTCTGAAGAAAAAGTCTATTTGGATGAAGTGAAAGGGTGTTCCCAAGATGAAGCAGATGCAAACTTTCAAGGGAAAGTGCATGAGTTCTCTTCTACAGCTGAGGAGCACAGACCCAGAGAAGCTGATTCACAAGAAGAATTTCAGGATTTTAATATGAGTAAAAGAAAGAGGAAAAACTGGTGGAAGCGCTTTGTGAACATCAGGAAAGGCGGTGAAGGAAATGCAGGGACAAATAAAACTCGAAGAATAAAGGTGAGGCAGAATAAAAAGAGGTGGCTGGAGTTCAGTGGCCTATACCTTGGACAAGAGGTTAGAGCACACAAAGGCCTAATCTGGAAAATGAAATTTAGTCCCTGTGGTCAGTATTTAGCAAGTGGAGGTGAAGATGGTGTTGTTTGCATATGGCGTGTTACATCACTGGATAAGTCCAGTATTTGTTCCACCACAGAAGACAGTACTTCTAATAGTAAAGTGGAATGTGACAACTCTTCTCCTCGGAACAAACACTCAAGTCAACCCTTCATTTTCCTTCCAAATAGTATTTTTCAAATTGAGGAATCACCACTGCAAGAATTCTTTGGTCATTCCAGTGATGTCTTGGATTTGGCTTGGTCTAATTCAGATATTCTCCTTTCATCTTCTATGGACAAGACTGTCCGCTTGTGGCAAATTGGTTGTAATCAATGTCTAAATGTTTTCCATCACAATGACTATGCAGTGACATGCATTCAGTTCAACCCTGTTGATGAAAATTACTTCATTAGTGGGTCCATTGATGGTAAGGTTCGAATATGGGGGATACGTGAAGAGCGAGTTATTGACTGGGCAGATATACGAGATGTCATAAGTGCTATAAGTTACCAGCAAGATGGGAAAGGATTTGTAGTTGGTTCTGTTACAGGCACTTGTTGTTTTTATGTTGCTTCTGGAACATATTTCCAGCTTGAGGCACAGATAGATGTCCATGGAAAAAAGAAAGTGTCAGGCAACAAGATTACCGGCATTCAGTTCTCCCAAAAAAACAGTCAGAGAATAATGATCACATCAGAAGATTCTAAAATTTGTATATTTGATGGCACTGAGCTTGTTCAGAAATACAAAGGTCTTCCTAAGTCAGGAAGTCAGATGTCTGGTTCATTTACATCAAGTGGAAAAAATATAATCTCAGTTGGAGAGGACTCCCATGTATATATTTGGAACTTTGATGACATGGGAAATGCTTCTTCGAAACAGACGAAATCTGAACGCTCCTGTGAGTACTTTTTCTCTAAAGGTGTTACTGTTGCAATACCTTGGTCAGGAATGAAAGCAGATCAAAGGGACTCTAGTGGTAATTATTCCCACCGTTCTTCAGAAATGCCAACCCAACAGCTAGAGGTTGCCCCTGAGACTAGAGATCACGAACTTTTTTCTCTTGGTAATTGGTTCACCACTGATGGCTCGTGTCGAGGTTCTATGACTTGGCCTGAGGAGAAACTTCCTAGCTGGGATTTACCTATAGCAGAAGAAGACCAGCAGTTATCTCACAAAGATAATTGCCATGACAGAAGTGTATCAGAAACATGGGGACTATCAATTGTGGCAGCTGGTTGTGATGGAACTATCAAGACATTCCACAACTTTGGATTGCCCGTTAGGCTTTAA 2004 0.4147 MLGYDDDDIDVFFDSVDSLSAQDSVLGKEGFDSERCGYDEIWVKEPVSVKERRERFLQGLGLADAASKVCSQEKMSFDDSSISLGLERIRECSGAISNACILHTDPVVSEKLILSGGKAASEEKVYLDEVKGCSQDEADANFQGKVHEFSSTAEEHRPREADSQEEFQDFNMSKRKRKNWWKRFVNIRKGGEGNAGTNKTRRIKVRQNKKRWLEFSGLYLGQEVRAHKGLIWKMKFSPCGQYLASGGEDGVVCIWRVTSLDKSSICSTTEDSTSNSKVECDNSSPRNKHSSQPFIFLPNSIFQIEESPLQEFFGHSSDVLDLAWSNSDILLSSSMDKTVRLWQIGCNQCLNVFHHNDYAVTCIQFNPVDENYFISGSIDGKVRIWGIREERVIDWADIRDVISAISYQQDGKGFVVGSVTGTCCFYVASGTYFQLEAQIDVHGKKKVSGNKITGIQFSQKNSQRIMITSEDSKICIFDGTELVQKYKGLPKSGSQMSGSFTSSGKNIISVGEDSHVYIWNFDDMGNASSKQTKSERSCEYFFSKGVTVAIPWSGMKADQRDSSGNYSHRSSEMPTQQLEVAPETRDHELFSLGNWFTTDGSCRGSMTWPEEKLPSWDLPIAEEDQQLSHKDNCHDRSVSETWGLSIVAAGCDGTIKTFHNFGLPVRL 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01355 667 ProSiteProfiles Trp-Asp (WD) repeats profile. 224 265 IPR001680 GO:0005515
Gma08g01355 667 SMART WD40_4 432 478 IPR001680 GO:0005515
Gma08g01355 667 SMART WD40_4 346 386 IPR001680 GO:0005515
Gma08g01355 667 SMART WD40_4 388 427 IPR001680 GO:0005515
Gma08g01355 667 SMART WD40_4 479 520 IPR001680 GO:0005515
Gma08g01355 667 SMART WD40_4 305 343 IPR001680 GO:0005515
Gma08g01355 667 SMART WD40_4 217 256 IPR001680 GO:0005515
Gma08g01355 667 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 312 344 - -
Gma08g01355 667 MobiDBLite consensus disorder prediction 558 578 - -
Gma08g01355 667 MobiDBLite consensus disorder prediction 267 291 - -
Gma08g01355 667 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 224 259 - -
Gma08g01355 667 ProSiteProfiles Trp-Asp (WD) repeats profile. 353 395 IPR001680 GO:0005515
Gma08g01355 667 MobiDBLite consensus disorder prediction 556 582 - -
Gma08g01355 667 PANTHER WD REPEAT DOMAIN 44 1 667 IPR040324 -
Gma08g01355 667 Pfam WD domain, G-beta repeat 223 255 IPR001680 GO:0005515
Gma08g01355 667 Pfam WD domain, G-beta repeat 348 385 IPR001680 GO:0005515
Gma08g01355 667 Pfam WD domain, G-beta repeat 307 342 IPR001680 GO:0005515
Gma08g01355 667 PRINTS G protein beta WD-40 repeat signature 243 257 IPR020472 -
Gma08g01355 667 PRINTS G protein beta WD-40 repeat signature 330 344 IPR020472 -
Gma08g01355 667 PRINTS G protein beta WD-40 repeat signature 373 387 IPR020472 -
Gma08g01355 667 SUPERFAMILY WD40 repeat-like 218 657 IPR036322 GO:0005515
Gma08g01355 667 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 1 667 - -
Gma08g01355 667 Gene3D - 216 548 IPR015943 GO:0005515
Gma08g01355 667 ProSiteProfiles Trp-Asp (WD) repeats profile. 312 352 IPR001680 GO:0005515
Gma08g01355 667 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 353 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01355 Gma-Chr8 11501181 11504742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01355 K20241 - gmx:100806747 1342.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01870 05 40158495 40163150 Gma08g01355 08 11501181 11504742 GST
Gma08g01355 08 11501181 11504742 Gma04g02070 04 51161436 51164700 PCT
Gma08g01355 08 11501181 11504742 Gma06g01345 06 12661115 12670056 PCT
Gma04g02070 04 51161436 51164700 Gma08g01355 08 11501181 11504742 PCT
Gma06g01345 06 12661115 12670056 Gma08g01355 08 11501181 11504742 PCT