Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01206 ATGGGAGGTAAGAGTTCAAAAGGGTCTGAAAGAAGGCATGTTTCATCATATGGATCTGCTGGTTCTTCATCTTCATGGGATGACTACGAATACCCTCAATCACCAAATGCATACCCACAACAAAATCCTTATCATACGCCTCTTCACCACCGTGCACCGGCTCCATTCCACGACTATTCACAGCCAAAAAGGAAATTGGATAGGAGATATTCAAGAATAGCTGATGATTACCATTCCCTGGATGAGGTTACCACTGCTCTTTCACATGCTGGCCTGGAATCTTCCAATCTCATTGTTGGAATTGATTTTACAAAGAGCAACGAGTGGACAGGGAAGAGGTCATTCAACCGAAAAAGTTTACATCATATAGGAAGTGGTCAGAATCCTTATGAACAAGCAATCTCGATCATTGGGAAAACATTAAGTGTTTTTGACGAGGATAACTTGATTCCTTGTTTTGGATTTGGAGATGCATCAACACATGATCAAGATGTCTTTAGTTTCCATTCAGATGAGAGGTTCTGCAATGGATTTGAGGAAGTTTTGTCAAGATATAGAGATATTGTTCCTCGCCTGCGTCTAGCAGGTGTTGCCTTCACCAATAATCTTACATTGCATTTTTTAAATAGGCTCAGCATGACTCATTGCATTTATGTGACAGGACCCACTTCATTTGCCCCTATTATTGAGATGGCCATGACTATAGTTGAGCAAAGTGGTGGCCAATATCATGTCCTGCTAATAATTGCTGATGGACAGGTGACCAGAAGTGTTGACACACAACATGGCCAGCTAAGTCCACAGGAAGAGAAGACAATTGGTGCAATTGTAAAAGCCAGCGGGTATCCACTTTCAATAGTTTTGGTAGGGGTTGGAGATGGACCGTGGGATATGATGAGGGAATTTGATGATAACATCCCAGCTCGAGCATTTGACAATTTTCAGTTTGTGAATTTTACGGAAATAATGTCAAAGGGTATAGACTCAAGCAGAAAAGAGACAGAGTTTGCGCTATCAGCTTTGATGGAGATACCTTCTCAATATAAGGCAACCATAGATCTTGGCATATTGGGTGCACGGAGAGGACATTCACCAGACAGGAATCGTCTTCAAGAAGCTCATATGATAATAAGGTTTGCCCGATTTGTCTTACTAATGGGAAGGATATGGCATTTGGTTGCGGGCATCAGACTTGTTGTGACTGTGGAGAAAACCTCGAATGCTGCCCCATTTGCCGAAGCACAATCACTACCAGAATAA 1260 0.4206 MGGKSSKGSERRHVSSYGSAGSSSSWDDYEYPQSPNAYPQQNPYHTPLHHRAPAPFHDYSQPKRKLDRRYSRIADDYHSLDEVTTALSHAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHHIGSGQNPYEQAISIIGKTLSVFDEDNLIPCFGFGDASTHDQDVFSFHSDERFCNGFEEVLSRYRDIVPRLRLAGVAFTNNLTLHFLNRLSMTHCIYVTGPTSFAPIIEMAMTIVEQSGGQYHVLLIIADGQVTRSVDTQHGQLSPQEEKTIGAIVKASGYPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMSKGIDSSRKETEFALSALMEIPSQYKATIDLGILGARRGHSPDRNRLQEAHMIIRFARFVLLMGRIWHLVAGIRLVVTVEKTSNAAPFAEAQSLPE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01206 419 MobiDBLite consensus disorder prediction 12 43 - -
Gma08g01206 419 MobiDBLite consensus disorder prediction 1 67 - -
Gma08g01206 419 Pfam Copine 215 357 IPR010734 -
Gma08g01206 419 Pfam Copine 119 196 IPR010734 -
Gma08g01206 419 PANTHER COPINE FAMILY PROTEIN 1 218 373 - -
Gma08g01206 419 PANTHER COPINE FAMILY PROTEIN 1 1 197 - -
Gma08g01206 419 SUPERFAMILY vWA-like 96 303 IPR036465 -
Gma08g01206 419 PANTHER RING-FINGER PROTEIN 218 373 - -
Gma08g01206 419 PANTHER RING-FINGER PROTEIN 1 197 - -
Gma08g01206 419 SMART VWA_4 94 322 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01206 Gma-Chr8 10262041 10265867 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01206 K16280 - gmx:100800161 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01206 08 10262041 10265867 Gma08g01206 08 10262041 10265867 ECH
Gma05g01720 05 38866162 38870253 Gma08g01206 08 10262041 10265867 GST
Gma08g01206 08 10262041 10265867 Gma18g00117 18 936606 940474 PCT
Gma08g01206 08 10262041 10265867 Gma11g02456 11 39866486 39870402 PCT