Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00047 ATGGCAGCTCTGGTCAACGCTGCAACAAGTGAGAAACTGGCTGAAACTGATTGGATGAAAAATATTGAAATCTGTGAATTAGTAGCTCATGATCAAAGGCAAGCTAGAGATGTTATTAAAGCTATAAAAAAGAGGCTGGGTAACAAGAATCCTAACATTCAACTTTATGCAGTTGTGTTGCTGGAAATGTTGATGAACAATATTGGAGATCTTGTTCACCAGCTGGTGATTGATACAGGAATTATTCCTATTCTTGTGAAAATTGTGAAGAAAAAATCAGATTTGCCTGTAAGGGAGCGGATATTTCTCCTACTAGATGCCACACAAACATCCCTAGGTGGCGCTTCTGGAAAGTTTCCACAATATTATAATGCATATTATGATTTGGTGAGTGCTGGAGTGCAGTTTCCTCAAAGGGATCAAGTGACTCAACCAAGTCGTCCTCATTCACAACTTAATGGGATTAACTATGTACAAAACAGGGAGCAGGCCCCGCCTAGACATCAGCAAGCAGAATCCCAAACTGTTCCTGAATCTAGCATTATTCAAAAGGCTAGTAATGCATTAGAAGTTTTAAAAGAAGTCCTTGATGCTATTAATGCCCAGCATCCTCAGGCTGCAAGAGATGAATTCACCCTTGACCTTGTTGAACAATGTTCATTTCAGAAGCAAAGGGTAATGCATCTTGTGATGGCTTCTCGAGATGAGAGTATAGTTTCTCGAGCAATAGAATTAAACGAGCAACTTCAGAAAGTTCTTGCAAGACATGATAGCCTTCTTTCGGGCAGACCCACAACAATAGCTAATCATTTGGAGTGTGAAGAAGCAGAGGAGGAAGAAGAACCAGAACAGTTATTCCGGCGATTAAGCAAAGGAAAGGCTTGTGCAAGGCCTGAAGATGAAGAAAGAGAATCTGAGTTTCCTCACTTGGGTTTGCTTGAAGAGAGACTCAACTGGCCGTTAATAAGACCGATATCTTTGGAGCCATCTCGAGAAGCTAATACTTATCCTGCGCCTGCTGTGATGCCTCCTCACATGGCAATTCCACCACCGCCTTCAAAGCACATTGAGAGGGAGAGATATTTTCAAGAAAATAAAAAGGATGGTGCTACTTTAGCTGGCCACTTGAGAGGCCTCTCCTTACATAGTCACAATGGCAGCAGCTCTCACAGTGGAAGCTTTGATTTTAGTGATTGA 1197 0.4177 MAALVNAATSEKLAETDWMKNIEICELVAHDQRQARDVIKAIKKRLGNKNPNIQLYAVVLLEMLMNNIGDLVHQLVIDTGIIPILVKIVKKKSDLPVRERIFLLLDATQTSLGGASGKFPQYYNAYYDLVSAGVQFPQRDQVTQPSRPHSQLNGINYVQNREQAPPRHQQAESQTVPESSIIQKASNALEVLKEVLDAINAQHPQAARDEFTLDLVEQCSFQKQRVMHLVMASRDESIVSRAIELNEQLQKVLARHDSLLSGRPTTIANHLECEEAEEEEEPEQLFRRLSKGKACARPEDEERESEFPHLGLLEERLNWPLIRPISLEPSREANTYPAPAVMPPHMAIPPPPSKHIERERYFQENKKDGATLAGHLRGLSLHSHNGSSSHSGSFDFSD 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00047 398 Pfam GAT domain 187 262 IPR004152 GO:0035091|GO:0043130
Gma08g00047 398 Gene3D - 1 135 IPR008942 -
Gma08g00047 398 ProSiteProfiles GAT domain profile. 173 261 IPR004152 GO:0035091|GO:0043130
Gma08g00047 398 SUPERFAMILY GAT-like domain 175 263 - -
Gma08g00047 398 Coils Coil 182 202 - -
Gma08g00047 398 Gene3D - 171 268 IPR038425 -
Gma08g00047 398 ProSiteProfiles VHS domain profile. 8 137 IPR002014 GO:0035091|GO:0043130
Gma08g00047 398 PANTHER TOM1-LIKE PROTEIN 1 398 IPR044836 GO:0035091|GO:0043130|GO:0043328
Gma08g00047 398 SMART VHS_2 1 133 IPR002014 GO:0035091|GO:0043130
Gma08g00047 398 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 398 - -
Gma08g00047 398 Pfam VHS domain 3 110 IPR002014 GO:0035091|GO:0043130
Gma08g00047 398 CDD VHS 1 129 - -
Gma08g00047 398 MobiDBLite consensus disorder prediction 363 398 - -
Gma08g00047 398 SUPERFAMILY ENTH/VHS domain 3 139 IPR008942 -
Gma08g00047 398 MobiDBLite consensus disorder prediction 381 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00047 Gma-Chr8 391261 396767 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00047 - - gmx:100790484 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01938 05 40780664 40784915 Gma08g00047 08 391261 396767 GST
Gma08g00047 08 391261 396767 Gma04g01994 04 50347041 50363991 PCT
Gma08g00047 08 391261 396767 Gma06g01423 06 13532287 13539061 PCT
Gma04g01994 04 50347041 50363991 Gma08g00047 08 391261 396767 PCT
Gma06g01423 06 13532287 13539061 Gma08g00047 08 391261 396767 PCT