Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01938 ATGGCAGCTCTGGTCAATGCTGCAACAAGTGAGAAACTGGCTGAAACTGACTGGATGAAAAATATTGAAATCTGTGAATTAGTTGCTCATGATCAAAGGCAAGCTAGAGATGTTGTTAAAGCTATAAAAAAGAGGCTGGGTAACAAGAACCCAAACATTCAACTTTATGCTGTCGCGTTGCTGGAAATGTTGATGAACAATATTGGAGATCGTGTTCACCAGCAGGTGATTGATACAGGAATTATTCCTATTCTTGTGAAAATTGTGAAGAAAAAATCAGATTTGCCTGTAAGGGAGCGGATATTTCTCCTATTAGATGCCACACAAACATCCCTTGGTGGTGCTTCTGGAAAGTTTCCACAGTATTATAATGCATATTATGATTTGGTGAGTGCTGGGGTGCAGTTTCCTCAAAGGGATCAAGTGACCCAATCAAATCGTCCCCGTTCACAACTTAATGGGATTAACAATGTACCGAACAGGGAGCAGGTCCCGCCTAGACATCAGCAAGCAGAGTCCCAAACTGTTCCTGAATCTAGCATTATTCAAAAGGCTAGTAATGCATTAGAAGTTTTAAAAGAAGTCCTTGATGCTATCGATGCCCAACATCCTCAGGCTGCAAGAGATGAATTCACCCTTGACCTTGTTGAACAATGTTCATTTCAGAAGCAAAGGGTAATGCATCTTGTGATGGCTTCTCGAGATGAGAGGATAGTTTCTCGAGCAATTGAATTAAATGAGCAACTTCAGAAAGTTCTTGCAAGACATGATAGCCTTCTTTCGGGCAGGCCCACAACAATAGCTAATCATTTGGAGTGTGAAGAAGCTGAGGATGAGGAGGATGAGGAGGAAGAACCAGAACAGTTATTCCGGAGATTACGCAAAGGAAAGGCTTGTGCAAGGCCTGAAGATGAAGAAAGAGAACCTGAGTTTCCTCACTTGTGTTTGCTGGAAGAGAGACTCAACCGGCCGTTAATAAGACCGCTATCTTTGGAGCCATCTCGAGAAGCTAATACTTATTCTGCACCTGCTGTGATTCCTCCTCACATGGCAATTCCACCACCGCCTTCAAAGCACATTGAGAGGGAGAGATATTTTCAGGAAAATAAAAAGGACGGTGCTACTTTGGCTGGCCACTTGAGAGGCCTCTCCTTACATAGTCACAATGGCAGCAGCTCTCACAGTGGAAGCTTTGATTTTAGTGATTGA 1209 0.4301 MAALVNAATSEKLAETDWMKNIEICELVAHDQRQARDVVKAIKKRLGNKNPNIQLYAVALLEMLMNNIGDRVHQQVIDTGIIPILVKIVKKKSDLPVRERIFLLLDATQTSLGGASGKFPQYYNAYYDLVSAGVQFPQRDQVTQSNRPRSQLNGINNVPNREQVPPRHQQAESQTVPESSIIQKASNALEVLKEVLDAIDAQHPQAARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSRAIELNEQLQKVLARHDSLLSGRPTTIANHLECEEAEDEEDEEEEPEQLFRRLRKGKACARPEDEEREPEFPHLCLLEERLNRPLIRPLSLEPSREANTYSAPAVIPPHMAIPPPPSKHIERERYFQENKKDGATLAGHLRGLSLHSHNGSSSHSGSFDFSD 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01938 402 PANTHER TOM1-LIKE PROTEIN 1 402 IPR044836 GO:0035091|GO:0043130|GO:0043328
Gma05g01938 402 Coils Coil 182 202 - -
Gma05g01938 402 MobiDBLite consensus disorder prediction 139 179 - -
Gma05g01938 402 ProSiteProfiles VHS domain profile. 8 137 IPR002014 GO:0035091|GO:0043130
Gma05g01938 402 Gene3D - 1 135 IPR008942 -
Gma05g01938 402 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 402 - -
Gma05g01938 402 ProSiteProfiles GAT domain profile. 173 261 IPR004152 GO:0035091|GO:0043130
Gma05g01938 402 SUPERFAMILY ENTH/VHS domain 3 139 IPR008942 -
Gma05g01938 402 SMART VHS_2 1 133 IPR002014 GO:0035091|GO:0043130
Gma05g01938 402 MobiDBLite consensus disorder prediction 367 402 - -
Gma05g01938 402 Gene3D - 171 269 IPR038425 -
Gma05g01938 402 SUPERFAMILY GAT-like domain 178 263 - -
Gma05g01938 402 CDD VHS 1 129 - -
Gma05g01938 402 Pfam VHS domain 3 110 IPR002014 GO:0035091|GO:0043130
Gma05g01938 402 MobiDBLite consensus disorder prediction 385 402 - -
Gma05g01938 402 Pfam GAT domain 187 262 IPR004152 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01938 Gma-Chr5 40780664 40784915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01938 - - gmx:100802949 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01938 05 40780664 40784915 Gma05g01938 05 40780664 40784915 ECH
Gma05g01938 05 40780664 40784915 Gma08g00047 08 391261 396767 GST
Gma05g01938 05 40780664 40784915 Gma04g01994 04 50347041 50363991 PCT
Gma05g01938 05 40780664 40784915 Gma06g01423 06 13532287 13539061 PCT
Gma04g01994 04 50347041 50363991 Gma05g01938 05 40780664 40784915 PCT
Gma06g01423 06 13532287 13539061 Gma05g01938 05 40780664 40784915 PCT