Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01423 ATGGCGGCTGAGCTAGTCAATGGTGCAACAAGCGAGAAGCTGGCTGAAACTGATTGGACAAAAAATATTGAAATTTGTGAGCTAGTTGCTCATGATAAAAGGGAAGCAAGAGATGTTGTTAAAGCTATAAAAAAGAGACTAGGAAGCAAACACTCCAATACTCAACTCTTTGCTGTCATGTTGCTGGAAATGTTGATGAACAATATTGGAGAGCATATTCATGAGCAGGTGATTGATACTGGAATTATTCCTATTCTAGTAAAAATTGTGAAGAAAAAGTCTGATTTGCCTGTGAGGGAGCGGATATTTCTCCTACTAGATGCCACACAAACATCCCTTGGTGGTGCATCTGGAAAGTTTCCACAGTATTATAATGCATATTATGATTTGGTGAGTGCTGGAGTGCAGTTTGCTCAAAGGGATCAAGTGGTCCAATCAAATAATCCTAGTTCACAACCTAGTAGGACTAGTAATGTACCAAACAGAGAGCAAGCCTCACCTAAACATGAAGCAGTTGCTCAGCCAGCAGAGTCCCAGACTGTCCCTGAATCTAGCATTATTCAAAAGGCTGGCAATGCATTAGAAGTACTAAAAGAGGTCCTTGATGTTGTTGATGCTCAAAATCCTCAGGGAGCAAGGGATGAATTCACCCTTGACCTTGTAGAACAATGTTCTTTTCAAAAACAAAGGGTTATGCATCTTGTGATGGCTTCCCGAGATGAAAGGATAGTTTCTCGAGCAATTGAATTGAATGAGCAACTTCAGAAAGTTCTTGCAAGACATGATGACCTTCTTGCTGGCAGAGCTACAACAACTGCCAGTCGATTTGACCATGAAGAAGCAGAGGAGGAAGAGGAGCCTGAACAGTTAGTCCGAAGATTACGCAAGGGAAAGGCTTGTGCAAGGCCTGAACACGAGGAGACTGAAACTGACATCCCTTGCTTGGGTTTGCTTGGAGAGAGACTCAATCGTCCTCTAATACGACCACTCTCGATAGAACCTCCAActcgagaagctgatactcgatctccacctgttgtgatcccaccatctcgagaagctgatacccgatctccacctgctgtgattccaccTCCACGGCCAAAACAGAATGGGCAGGTTCCTCACCCTGTAGCAATTCCACCACCACCTGCAAAACACATTGAGAGGGAGAGGTTTTTTCTGGAAAACAAGGATGGTTCTAATTTGTCTGGCCACATGAGGGGCCTCTCTTTACATAGTCGTAACGGCAGCAGCTCTCGCAGTGGAAGCTTTGATTTTAGTGACTGA 1290 0.4054 MAAELVNGATSEKLAETDWTKNIEICELVAHDKREARDVVKAIKKRLGSKHSNTQLFAVMLLEMLMNNIGEHIHEQVIDTGIIPILVKIVKKKSDLPVRERIFLLLDATQTSLGGASGKFPQYYNAYYDLVSAGVQFAQRDQVVQSNNPSSQPSRTSNVPNREQASPKHEAVAQPAESQTVPESSIIQKAGNALEVLKEVLDVVDAQNPQGARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSRAIELNEQLQKVLARHDDLLAGRATTTASRFDHEEAEEEEEPEQLVRRLRKGKACARPEHEETETDIPCLGLLGERLNRPLIRPLSIEPPTREADTRSPPVVIPPSREADTRSPPAVIPPPRPKQNGQVPHPVAIPPPPAKHIERERFFLENKDGSNLSGHMRGLSLHSRNGSSSRSGSFDFSD 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01423 429 Gene3D - 2 136 IPR008942 -
Gma06g01423 429 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Gma06g01423 429 MobiDBLite consensus disorder prediction 142 164 - -
Gma06g01423 429 SUPERFAMILY ENTH/VHS domain 4 137 IPR008942 -
Gma06g01423 429 PANTHER TOM1-LIKE PROTEIN 1 429 IPR044836 GO:0035091|GO:0043130|GO:0043328
Gma06g01423 429 MobiDBLite consensus disorder prediction 272 312 - -
Gma06g01423 429 SUPERFAMILY GAT-like domain 143 267 - -
Gma06g01423 429 MobiDBLite consensus disorder prediction 407 429 - -
Gma06g01423 429 MobiDBLite consensus disorder prediction 329 384 - -
Gma06g01423 429 MobiDBLite consensus disorder prediction 287 311 - -
Gma06g01423 429 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Gma06g01423 429 CDD VHS 2 130 - -
Gma06g01423 429 Gene3D - 176 275 IPR038425 -
Gma06g01423 429 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Gma06g01423 429 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 429 - -
Gma06g01423 429 MobiDBLite consensus disorder prediction 396 429 - -
Gma06g01423 429 MobiDBLite consensus disorder prediction 142 183 - -
Gma06g01423 429 Pfam VHS domain 5 111 IPR002014 GO:0035091|GO:0043130
Gma06g01423 429 MobiDBLite consensus disorder prediction 359 384 - -
Gma06g01423 429 Pfam GAT domain 194 267 IPR004152 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01423 Gma-Chr6 13532287 13539061 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01423 - - gmx:100785131 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01994 04 50347041 50363991 Gma06g01423 06 13532287 13539061 GST
Gma05g01938 05 40780664 40784915 Gma06g01423 06 13532287 13539061 PCT
Gma08g00047 08 391261 396767 Gma06g01423 06 13532287 13539061 PCT
Gma06g01423 06 13532287 13539061 Gma05g01938 05 40780664 40784915 PCT
Gma06g01423 06 13532287 13539061 Gma08g00047 08 391261 396767 PCT